NAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATTAAAAATGAACTGAAAACCAGTCTTCATTTACCTCTACCT
GTTGTTAAAATGGCAGATTCCCGAAATTTCTATGTATAGGCTCCAATTGC
CTCAAAATACAGAGGCTCCTCTCAGCCTCAGAAGTGCTGGGACTTCAGAC
ATAATTCAGGCCAGGTTGTTGTTATTTATTTGTTGTTTTGGTTTAGGACA
GTAAGCTCTAACTCTATATCTCAGGATTGTCTGAAACCTCACCTGCAGCT
TTGACTGGCCTTGAAACTGAAGTCCCCAGCCTTACAAATGTACCTGGGCC
TGAGGAAATATGTGTTCTTTATTTTTTATATTTAAATTTTTGTTTGTTTG
TTTGTTTGTTTGTTTGTTTGTTTTTTATTCCTTTTTTCCTTGTTGAAGAT
TGAAACCAGAGCTTCTTGCTGTAGCAGTAAAATATTTGTCCAGCCAGAAA
AACTTTATATTTTAGATCTGCTTTAGATTTGTATTATGATGAAAAAAATT
GAGGAGCTTGGTTATGATAAAAGCAACCATGATTTCATTTGGAGATTGAT
ATGCAAACACATTTACTCTAATTTATCAAAACCCTAGCAACAATGGGACC
AAAATTTAGATCATCCTGTGATTGCATATAAACCCACTTGAAGTCACAGT
TAAAGCCATCATATTATGTGTGTGTGTGTGTGTTTTGCTTGTCTCTCTTT
TAAATTCAACATCTAAATAAACCCA

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGGGTCCATATTAATGGAGACATCTAG
TCCTCCTACAGGGTTGATCTCCTCCTCAGTCTCCTTCAGTTTTTCTCCAA
TTAAACCAATGGTTCAACATATTCTGCCCGTTGGTTGGTTGCATACAACT
TCATCTGATTGTTTCACCTACTTGTTAGTTCTTAAGAAGTACAGTCATGG
TAGTATTAATATTACAAATGTGTGAATTCAGAAAACTGCAGAGGTTGCTT
ACTGCAAGAAGGTATTCTGCAAAAGCAATAGATGATAAAAGTACTGAAAT
ATCTATCAGTGCTCTACAATATTATATTCTAGGTGATGAAATTTCTCTTT
CTCTCTGTCTCTGTGTCTCTGTGTCTCTGTCTCTATCTCTATGTCTGTCT
GTCTGTTTGTCTCTCTCTCTCTCTCTCTCAATTTCTACTTCTCTAATACT
TATTATGAATTATGATTCTTTTATCTTATTCCCTCCAATGGGAATGATAT
TGGAATGNCATCTGTAACATTCATTCACATTCCTACACAATTTGTGCTTT
CTATTAACAATCAACTATTATCAAAGTCACACATTTCCTCTGATTAACAA
ATAAGATATCTGAGCTCATGTAAAGTGATAATTCTGAAACAAAGAAAGGA
AAGGGAACTCTCAATGGGAAGTTTCCTCACAAAAATGGTTTTTAATAAAT
GGGCATTTGTAAAAAATAAAACAAGGATA

Query= MSMg01no374_p19.b1 MSMg01no374_p19.b1 CHROMAT_FILE:
MSMg01no374_p19.b1 PHD_FILE: MSMg01no374_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:25 2005
         (577 letters)



>mm_chrX_53389991_53390968
          Length = 978

 Score =  453 bits (234), Expect = e-131
 Identities = 480/584 (82%), Gaps = 52/584 (8%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcattaaaaatgaactgaaaaccagtcttcatttacctctacctgttgttaaaat 63
           ||||||||| |||||  ||||||| |||||||||||||| |||||||||| | || ||| 
Sbjct: 204 ggaattcatgaaaaacaaactgaagaccagtcttcattttcctctacctggtattgaaa- 262

                                                                       
Query: 64  gg-cagattcccgaaatttctatgtataggctcc-aattgcctcaaaatacagaggctcc 121
           || |||||| ||||||||| ||| |||||||||| || |||||| |||| ||||||||||
Sbjct: 263 ggccagattgccgaaatttgtatatataggctccaaactgcctccaaatccagaggctcc 322

                                                                       
Query: 122 tctcagcctcagaagtgctgggacttcagacataattcaggccaggttgttgtt-attta 180
           |||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||
Sbjct: 323 tctcagcctcagaagtgctgggacttcagacataattcaggccaggctgt-gtttattta 381

                                                                       
Query: 181 tttgttgttttggtttagg-acagtaagctctaactctatatctcaggattgtctg-aaa 238
           | ||||||||||||||||| || || |||||||||||| ||||| |||| ||| || |||
Sbjct: 382 tgtgttgttttggtttagggac-gtgagctctaactctgtatcttaggagtgt-tggaaa 439

                                                                       
Query: 239 cctcacctgcagctttgactggccttgaaactgaagtccccagccttacaaatgtacctg 298
           |||||  |||||||| ||||  ||||||||||||||||| |||||||||||||||||   
Sbjct: 440 cctcatgtgcagcttggactcaccttgaaactgaagtcctcagccttacaaatgtaca-- 497

                                                                       
Query: 299 gg--cctgaggaaatatg--tgttctttattttttatatttaaatttttgtttgtttgtt 354
           ||  || ||||||| |||  ||  ||||||||||||| ||||| ||||||   |   |||
Sbjct: 498 ggaaccggaggaaacatgcctg--ctttattttttatttttaattttttg---g---gtt 549

                                                                       
Query: 355 tgtttgtttgtttgtttgttttttattccttttttccttgttgaagattgaaaccagagc 414
           | |||               |||||||            |||||||| |||| |||||||
Sbjct: 550 t-ttt---------------ttttatt------------gttgaagactgaacccagagc 581

                                                                       
Query: 415 ttcttgctgtagcagtaaaatatttgtccagccagaaa-aactttatattttagatctgc 473
           ||||||||||||||||||||||| |||||||||||  | ||||||||| ||||||| |||
Sbjct: 582 ttcttgctgtagcagtaaaatatatgtccagccaggcagaactttataatttagatttgc 641

                                                                       
Query: 474 tttagatttgtattatgatgaaaaaaattgaggagcttggttatgataaaagcaaccatg 533
           ||||||||||| ||  ||||||||| ||||||||||||| || |||||| || ||| |||
Sbjct: 642 tttagatttgtgttgcgatgaaaaagattgaggagcttgcttgtgataataggaactatg 701

                                                       
Query: 534 atttcatttggagattgatatgcaaacacatttactctaattta 577
           |||| ||||||||||||| ||||| |||||||| ||| ||||||
Sbjct: 702 attttatttggagattgagatgcagacacatttgctcaaattta 745


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 978
Length adjustment: 10
Effective length of query: 567
Effective length of database: 968
Effective search space:   548856
Effective search space used:   548856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)