TCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATCAATTGTTCTTCAACATCTACTCAGATTATTGTGCTTATTTTA
TCTCATTAGTAGTGTTTATTATACTTATTACTATATAATAAATCAATTCA
CACTTTTGAGATAAATTCCACTTGTCCATGTATGATTTTTGATATGATAC
ATAATTGGATTTGGTAGTATTTTATTTAGGGTTAATATATCTATGTTCAT
AAAAGATATCAATAATTGTATGCTTTTTATGTTTATTTGTTTGACTTTGG
CATCAGGGTAATTAATACTCATTTTTTTGTTTGTTTGTTTTCTGAACATT
CATAAGAATAAGTGCTGGGCTGGAGAGATGGCTCAGCTGTTAAAGGCTAG
GCTCACAACTAAAAATATAAGAATAAGTGCTAAACATACTAATTGTAGTC
AGGCAGTGGTGGCACATAGTTTTGATCCCAGAACTTGGGAGGCAGAGGCA
GGTGGATCTTTGTAGGCCAGTCTGGTCTACAGAGTGAGTTCCAGGACAGC
CAGGGCTACAAAGAGAAACCTATCACCCCTCCCAAAAAAACCCAAAAATT
AATTCTTCTTTATATTACTTAGAATTTACAGGGGAACCTCCTGAACTTGG
ACTCTCTTTCTGTGCGAAATTCATGGACTAATTTGAAGATTACCTTAAGT
AAACCCTCCCCGAAAGAAACTTGGGCGAATTTAAAAAGGAACCGGCCCCT
GGTTAAATTAAACTTAAAAACCCTGGG

CGATGATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACCATGCTTCAGAGGGAGAAGAAGCCAC
TAGTCATGTGAGATCTAGGGTGGAATGGCCATTGGCCGCCTCCCTGACTG
GGCCTGGAATAGCAGGTGGGAGGTTAGAAACATAACTAAGCTGAGGGCAG
ATTTAGAGTGTTGAGCTGGGAGTGAAAAAAAGGATGTGATAGTCCATGAA
GGCTTAGAAGAGCCTGGCCATTGAGCTAAACCATATTAAAATAAGCTAAT
GTTTGTGTGTGTCTTTCACCCTCAGGTCTGAGGGAACCTTGGTGGGGCTG
GTAGCACAGGACATCTGGGACTTAAAGTGGGTAGCAAAAACTACGTGCTA
CAACTAACTGCAGTGAAATTTTAGTACCACAGATCTGCTATATCTTTATG
ATTTATAATGCTTTGGATGGCTTCAAATTTATCCAATGTGCATTTTANGG
GGTGTTTTTTTGTGGGTGTTCCACCAGAACCAGTTTTCCTACCTACAGGG
GATGACATTGCCCCCTTGAGAGACAATAATTTAGGGCCGGGGTTTCTCCT
AAGGGAATTTTCTCTCACTGGGAAACACTGGGAAAATCTCGAAATGTTTT
ATCCCCAAAAAAAAAAACCCTCTTTTTTTTTGTTTCAAAAGGCAACATTC
TCGGGGGGGGGGGGAGATGGGCTCTTCTTCCCNCTTCCCTAATTCCCAAT
TTTCTACTACTTTTCTCTCTCGCCCGTCATCTTCT

Query= MSMg01no376_c23.b1 MSMg01no376_c23.b1 CHROMAT_FILE:
MSMg01no376_c23.b1 PHD_FILE: MSMg01no376_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:01 2005
         (437 letters)



>mm_chrX_19554117_19554953
          Length = 837

 Score =  752 bits (389), Expect = 0.0
 Identities = 421/433 (97%), Gaps = 3/433 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatcaattgttcttcaacatctactcagattattgtgcttattttatctcattag 64
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcatcaatggttcttcaacatctactcagattattgtgcttattttatctcattag 267

                                                                       
Query: 65  tagtgtttattatacttattactatataataaatcaattcacacttttgagataaattcc 124
           ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 268 tagggtttattatacttattactatataataaatcaattcacactattgagataaattcc 327

                                                                       
Query: 125 acttgtccatgtatgatttttgatatgatacataattggatttggtagtattttatttag 184
           ||||||||||||||||||||||||   ||||||||||||| |||||||||||||||| ||
Sbjct: 328 acttgtccatgtatgatttttgat---atacataattggacttggtagtattttattgag 384

                                                                       
Query: 185 ggttaatatatctatgttcataaaagatatcaataattgtatgctttttatgtttatttg 244
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 385 ggttaatatatctatgttcataaaagatatcaatatttgtatgctttttatgtttatttg 444

                                                                       
Query: 245 tttgactttggcatcagggtaattaatactcatttttttgtttgtttgttttctgaacat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttgactttggcatcagggtaattaatactcatttttttgtttgtttgttttctgaacat 504

                                                                       
Query: 305 tcataagaataagtgctgggctggagagatggctcagctgttaaaggctaggctcacaac 364
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 505 tcataagaataagtgctgggctggagagatggatcagctgttaaaggctaggctcccaac 564

                                                                       
Query: 365 taaaaatataagaataagtgctaaacatactaattgtagtcaggcagtggtggcacatag 424
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 565 taaaaatataagaataagtgctaaacatactaatcgtagtcaggcagtggtggcacatag 624

                        
Query: 425 ttttgatcccaga 437
           |||||||||||||
Sbjct: 625 ttttgatcccaga 637


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space:   354384
Effective search space used:   354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)