Query= MSMg01no376_d03.b1 MSMg01no376_d03.b1 CHROMAT_FILE:
MSMg01no376_d03.b1 PHD_FILE: MSMg01no376_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:02 2005
(594 letters)
>mm_chrX_165347626_165348620
Length = 995
Score = 1120 bits (579), Expect = 0.0
Identities = 588/591 (99%), Gaps = 1/591 (0%)
Strand = Plus / Minus
Query: 5 gaattcgctcactttgtgaaatgactaaagagctggtgtagagaattattggcactggca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 gaattcgctcactttgtgaaatgactaaagagctggtgtagagaattattggcactggca 736
Query: 65 actgatgtccaagagttgcctaaaatttgaaccagagggagccagtatagtttatcttaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 actgatgtccaagagttgcctaaaatttgaaccagagggagccagtatagtttatcttaa 676
Query: 125 ttttaaacaaattcttttgcagaactaaatagataaatacagaagacaaatacaaatgtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ttttaaacaaattcttttgcagaactaaatagataaatacagaagacaaatacaaatgtc 616
Query: 185 caaaagtgggtggtagaagtaacatttctggaactagaagagacccagacaagtgtctta 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 caaaagtgggtggtagaagcaacatttctggaactagaagagacccagacaagtgtctta 556
Query: 245 gacaacatcacagttttgtgattttgccatgatacacaggcaggtctatgaaacacatga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gacaacatcacagttttgtgattttgccatgatacacaggcaggtctatgaaacacatga 496
Query: 305 ggatccagatgacagtttcaaagtcaaaagaaaaactaaactatcagtattttaatatgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ggatccagatgacagtttcaaagtcaaaagaaaaactaaactatcagtattttaatatgt 436
Query: 365 atattttactggaagattcatagtgaatgtctcacaatgccatcttcattctaactgttg 424
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atattttactggaagattcctagtgaatgtctcacaatgccatcttcattctaactgttg 376
Query: 425 gtaaatg-aaaaaaaaagtttgttagggatttttaacctaattagaagaagcatcgtttt 483
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtaaatgaaaaaaaaaagtttgttagggatttttaacctaattagaagaagcatcgtttt 316
Query: 484 atctaaagagtcaaagtaaaacatgtggaggaaagagaactcatcattaaaccatgtcaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atctaaagagtcaaagtaaaacatgtggaggaaagagaactcatcattaaaccatgtcaa 256
Query: 544 taacattataatgaaacaccatcttattaccacattccacagttctgaata 594
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 taacattataatgaaacaccatcttattaccacattccacagttctgaata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 995
Length adjustment: 10
Effective length of query: 584
Effective length of database: 985
Effective search space: 575240
Effective search space used: 575240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_d03.g1 MSMg01no376_d03.g1 CHROMAT_FILE:
MSMg01no376_d03.g1 PHD_FILE: MSMg01no376_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:02 2005
(529 letters)
>mm_chrX_165222455_165223383
Length = 929
Score = 977 bits (505), Expect = 0.0
Identities = 520/525 (99%)
Strand = Plus / Plus
Query: 1 cacataaatcataaaggaggcagttgaagagtgggcagctatgaacttataccatttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacataaatcataaaggaggcagttgaagagtgggcagctatgaacttataccatttggc 260
Query: 61 tgtttcaactataaccttggaagtttctcctgagagaaagaaagcctcctgtggtttgag 120
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 261 tgtttcaactataaccttggaagttcctcctgagagaaagaaagcctcatgtggtttgag 320
Query: 121 tactccttacttgctgaggagtttgcacagctcctagttgtctgttcaaaggttttctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactccttacttgctgaggagtttgcacagctcctagttgtctgttcaaaggttttctag 380
Query: 181 tcctttcctgcctgatctagtatttgacttcagttatgccctcggcactttacatgtgga 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 tcctttcctgcctgatctagtatttgacttgagttatgccctcggcactttacatgtgga 440
Query: 241 gtggagcaaacaccacaaaatggcaaactaaagcatcctcacagagctctgcatttaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggagcaaacaccacaaaatggcaaactaaagcatcctcacagagctctgcatttaaac 500
Query: 301 ttgtattctgtgtgtgttgggtttatgtgcaggtgaatacgtgccacagcatgacggtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtattctgtgtgtgttgggtttatgtgcaggtgaatacgtgccacagcatgacggtgg 560
Query: 361 gcgtcaacctacattcaggggttagttctcttctatctcgggtgctggggatagaactca 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcgtcaagctacattcaggggttagttctcttctatctcgggtgctggggatagaactca 620
Query: 421 gaccatcagtcctgcaagcgtgttcccagggctgtaccatcttgaggctctttctggtta 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaccatcagtcctgcaagtgtgttcccagggctgtaccatcttgaggctctttctggtta 680
Query: 481 gagctggaatatactttcacagaatgctgatcaatcataaaaaaa 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagctggaatatactttcacagaatgctgatcaatcataaaaaaa 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
