ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCACATGTATGTCTCTGTGTATTTGTACATTCATATGAATGCAGGTGTCT
ACAGAGGCCACTGAAAATAGAGTTACGGTGGTTATTAGCTACTTGATATG
GGTGGTGGGAAATACACTCAGGCCTTCTGGGAAAGAAGCATAAGATGGAC
ATAGTCTATGTATATGGATATTTTGTCTGTGGGTGCATATATGTGCCAAT
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGNNNN
NNNNNNNNNNNNNNTTTTTTTTTTTNNNNNNNNNNTNTNNNNNNNNNNNN
NNTNTTTTTTTTTTTTTTTTNNTTTTTTTTTTTTTTTTTTTTTTTTNTTT
TTTTTTTTTTTTCCCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTCTCTTCTTTCCTTTTCCCTTTTTCTTTCTCTTTTTCTTTCT
TTTTTCTTCTTTTCTTCTTTCCTCTTCCTCTNTTCTTCTCCTCTCCCCCT
TTTTCTTTCCCTTTTCTTCTCTCTTTTTTTTTTTCTTTCTTTCCCTTCTC
TCTTCTCTCCTCCCTTCTTTCCTTTTCTTTCCTTCCTTTTTCTCTCTTCT
TTTCTCCCTTCCCCCCTTTCTCCCCCCCTCTCCTCTCCTCTTCTTCTCTC
CTTTCCCTCCTTTTCCTCCTCCTTCTCTTCTCTCCCTTTCTTCT

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAACTCAGGCAGTCAGGCCCAGAAGCAGGT
ATTTTACCAGTTGAGCTCTTTTCCACAGTGTCTATATACATTTAAGAGGA
TCATATTTATTCTTATAAATTCATTTCTCCAGTTGGCATGAAAGAAAATC
TTGGGCATTAATGTTAACAACAAGAAAAACAACAACAACAAAAAAAGGAT
TCAACTTTCCAAATTCTCTGACTCTGTCCAGTTTTTCTTTTATGTGCATA
AGTGTTGTGCCTGCACGCATATCTGCTTAGCACATTCCTTCAGTCATAGG
GTCTTCTTTTTATTTTATTGGTTATTTTATTTATTTACATTTCAAATGTT
ATCCCCCTTCCCAGTGAAACCTCCTATCCCCTCCTCAGTGACCCAGCACA
GTTGAATGTGAGAGGCAACACATTGCCTCATTTTGAAGTGTTACCTACAT
GGTTCCATTAACCCTCAACATGTTTGACTATTGTCAATACTCTTGGCTAC
TCTCCAGAACTTGATAATAAGACCCTATGACTATAAGGGAACTCTCCCGC
CCGCCCACCCCTTCCTGCCTCAGTGCCCTCGCATTGATGGTACAAAATAT
ATGGATCTGTTTCCTAGCCCATTTGTTAAACTATTACTGGGGAAAAAATG
AAATCATTGAAACAAAAGGTTATTTTAAAACAATTCATTATATTCN

Query= MSMg01no376_m09.g1 MSMg01no376_m09.g1 CHROMAT_FILE:
MSMg01no376_m09.g1 PHD_FILE: MSMg01no376_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:45 2005
         (530 letters)



>mm_chrX_84088271_84089196
          Length = 926

 Score =  750 bits (388), Expect = 0.0
 Identities = 403/410 (98%), Gaps = 4/410 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aactcaggcagtcaggcccagaagcaggtattttaccagttgagctcttttccacagtgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 406 aactcaggcagtcaggcccagaagcaggtattttaccagttgagctcttttccacggtgt 347

                                                                       
Query: 61  ctatatacatttaagaggatcatatttattcttataaattcatttctccagttggcatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ctatatacatttaagaggatcatatttattcttataaattcatttctccagttggcatga 287

                                                                       
Query: 121 aagaaaatcttgggcattaatgttaacaacaagaaaaacaacaacaacaaaaaaaggatt 180
           |||||||||||||||||||||||||||||||||||||||||||||    |||||||||||
Sbjct: 286 aagaaaatcttgggcattaatgttaacaacaagaaaaacaacaac----aaaaaaggatt 231

                                                                       
Query: 181 caactttccaaattctctgactctgtccagtttttcttttatgtgcataagtgttgtgcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 230 caactttccaaattctctgactctgtccagtttttcttttatgtgcataagtgttgttcc 171

                                                                       
Query: 241 tgcacgcatatctgcttagcacattccttcagtcatagggtcttctttttattttattgg 300
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tgcatgcatatctgcttagcacattccttcagtcatagggtcttctttttattttattgg 111

                                                                       
Query: 301 ttattttatttatttacatttcaaatgttatcccccttcccagtgaaacctcctatcccc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ttattttatttatttacatttcaaatgttatcccccttcccagtgaaacctcctatcccc 51

                                                             
Query: 361 tcctcagtgacccagcacagttgaatgtgagaggcaacacattgcctcat 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50  tcctcagtgacccagcacagttgaatgtgagaggcaacacattgcctcat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 926
Length adjustment: 10
Effective length of query: 520
Effective length of database: 916
Effective search space:   476320
Effective search space used:   476320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)