Query= MSMg01no377_h04.b1 MSMg01no377_h04.b1 CHROMAT_FILE:
MSMg01no377_h04.b1 PHD_FILE: MSMg01no377_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:37 2005
(478 letters)
>mm_chrX_36554694_36555571
Length = 878
Score = 855 bits (442), Expect = 0.0
Identities = 459/472 (97%), Gaps = 13/472 (2%)
Strand = Plus / Minus
Query: 5 gaattcttgactctccttcgggatttatctcagtttggtccctattgctgacttgatctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gaattcttgactctccttcgggatttatctcagtttggtccctattgctgacttgatctt 402
Query: 65 cacatttatcatccatttgcctggccatcttcctattcatctgtctggacctgccatcta 124
|| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ca-----------catttgcctggccatcttcctattcatctgtctggacctgccatcta 353
Query: 125 actctatccattctttcatctggaccccatcttacccttttgtatctgcagtcacattct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 actctatccattctttcatctggaccccatcttacccttttgtatctgcagtcacattct 293
Query: 185 gctctgctgctttgc--ttttttttaaatgttttttattattacgtattttcctcaatta 242
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gctctgctgctttgcttttttttttaaatgttttttattattacgtattttcctcaatta 233
Query: 243 catttagaatgctatcccaaaagtcccccataccctcccccaaacttccctatccaccca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 catttagaatgctatcccaaaagtcccccataccctcccccaaacttccctatccaccca 173
Query: 303 ttcccattttttggccctggcattcccctgtactggggcatataaagtttgcgtgtccag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 ttcccattttttggccctggcattcccctgtactggggcatataaagtttgcgtgtccag 113
Query: 363 tgggcctctctttccagtgatggccaactaggccatcttttgatacatatgcagctagag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 tgggcctctctttccagtgatggccaactaggccatcttttgatacatatgcagctagag 53
Query: 423 tcaagaactctggggtactggttagttcataatgttgttgcacctacagggt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 tcaagaactctggggtactggttagttcataatgttgttgcacctacagggt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_h04.g1 MSMg01no377_h04.g1 CHROMAT_FILE:
MSMg01no377_h04.g1 PHD_FILE: MSMg01no377_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:38 2005
(450 letters)
>mm_chrX_36521236_36522085
Length = 850
Score = 862 bits (446), Expect = 0.0
Identities = 449/450 (99%)
Strand = Plus / Plus
Query: 1 ttggagggggggactggaaatgggggcaatatttggaatgtaaataaaacaattcagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggagggggggactggaaatgggggcaatatttggaatgtaaataaaacaattcagaat 260
Query: 61 caataacataaaaagagtgagagaacatggccagagtccaaatgcaactttctttttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caataacataaaaagagtgagagaacatggccagagtccaaatgcaactttctttttctt 320
Query: 121 tttttaaagatttatgtatttatttaatgtatataagtagctgtcttcagacacacataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttaaagatttatgtatttatttaatgtatataagtagctgtcttcagacacacataa 380
Query: 181 ctagctgtcttcagagacacctaaagagggcatcagatcccattacagatggttgtgagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctagctgtcttcagagacacctaaagagggcatcagatcccattacagatggttgtgagc 440
Query: 241 caccacgtgtttgctgggaattgaactcggtatctctagagatgtagccagtgttcttaa 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 caccacgtgtttgctgggaattgaactcagtatctctagagatgtagccagtgttcttaa 500
Query: 301 ctgctaagccatctctccagtccccaaatgtaactttcaatggcatcctcgcagtcatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgctaagccatctctccagtccccaaatgtaactttcaatggcatcctcgcagtcatct 560
Query: 361 agttactccaaatagtccttacttcctaaagtttccgtcactccccaatagcacttttga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agttactccaaatagtccttacttcctaaagtttccgtcactccccaatagcacttttga 620
Query: 421 ctggggaccaagcctctaacatgttacaat 450
||||||||||||||||||||||||||||||
Sbjct: 621 ctggggaccaagcctctaacatgttacaat 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
