Query= MSMg01no380_a04.b1 MSMg01no380_a04.b1 CHROMAT_FILE:
MSMg01no380_a04.b1 PHD_FILE: MSMg01no380_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:56 2005
(519 letters)
>mm_chrX_82204950_82205869
Length = 920
Score = 750 bits (388), Expect = 0.0
Identities = 415/424 (97%), Gaps = 1/424 (0%)
Strand = Plus / Minus
Query: 11 gaattcacggcctgtagacaaaccctactaacccatagcatgaagcagacagaacttacc 70
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 632 gaattcacggcctggagacaaaccctactaacccatagcatgaagcagacagaactttcc 573
Query: 71 tgtcaagctttagctagacccaaaagcataaaaatagaatccaacatccttccatgtgtt 130
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 572 agtcaagctttagctagacccaaaagcataaaaacagaatccaacatccttccatgtgtt 513
Query: 131 tagtcattccctctgcttgcatctgaggatgagtggcgattattcccctagtatggagtg 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tagtcattccctctgcttgcatctgaggatgagtggcgattattcccctagtatggagtg 453
Query: 191 ctggaatggcgatttttcccactagtatggagtgctgaagcttttgagacccactaacta 250
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ctggactggcgatttttcccactagtatggagtgctgaagcttttgagacccactaacta 393
Query: 251 gtcacagtaagccccttctatacagctgatcatccatcctgtttacaaataagaacctgc 310
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gtcacggtaagccccttctatacagctgatcatccatcctgtttacaaataagaacctgc 333
Query: 311 acatgttaatatactgcccaggc-ttttttttttttaacgatcatatatttaattttgta 369
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 332 acatgttaatatactgcccaggctttttttttttttaacaatcatatatttaattttgta 273
Query: 370 gggctgttgtgagaatcctgctgtcacttgcatggcatagtttatatatttttgctttaa 429
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gggctgttgtgagaatcctgttgtcacttgcatggcatagtttatatatttttgctttaa 213
Query: 430 tctt 433
||||
Sbjct: 212 tctt 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 920
Length adjustment: 10
Effective length of query: 509
Effective length of database: 910
Effective search space: 463190
Effective search space used: 463190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_a04.g1 MSMg01no380_a04.g1 CHROMAT_FILE:
MSMg01no380_a04.g1 PHD_FILE: MSMg01no380_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:57 2005
(528 letters)
>mm_chrX_82075199_82076126
Length = 928
Score = 1021 bits (528), Expect = 0.0
Identities = 528/528 (100%)
Strand = Plus / Plus
Query: 1 ttagaaaatagacatttgtcctcagatcatttctgctttagcatttctaagttgataaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagaaaatagacatttgtcctcagatcatttctgctttagcatttctaagttgataaca 260
Query: 61 cattgaatggaaaatcaaattcacccaaaaaacctgatttgtttcaatagtaagtgccga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattgaatggaaaatcaaattcacccaaaaaacctgatttgtttcaatagtaagtgccga 320
Query: 121 ccacatcaaaccaaaattaaatgaagattaccattataaaacaaagtaggtgtaatatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacatcaaaccaaaattaaatgaagattaccattataaaacaaagtaggtgtaatatat 380
Query: 181 tgcacaagtatcccacatccttagatttatctagtattcattattcatacatacagagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcacaagtatcccacatccttagatttatctagtattcattattcatacatacagagga 440
Query: 241 agcctgtccttaacttatgttaatgagataaagcatgtctctgcactaattatatatgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcctgtccttaacttatgttaatgagataaagcatgtctctgcactaattatatatgta 500
Query: 301 aacatgcattacttcatttttggtattgtattggcaacatgttacatcctatacctatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacatgcattacttcatttttggtattgtattggcaacatgttacatcctatacctatgc 560
Query: 361 atatattttgggttgatatttgtttcttcataaacttacataacaatataaattgcttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atatattttgggttgatatttgtttcttcataaacttacataacaatataaattgcttaa 620
Query: 421 ataaaaatgtacataatagctaagctatacaatcacaaggacttatatgtggttctatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataaaaatgtacataatagctaagctatacaatcacaaggacttatatgtggttctatca 680
Query: 481 ccagtaatagaatattcatgacatataacagctattccattctacttt 528
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccagtaatagaatattcatgacatataacagctattccattctacttt 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
