CGGCGCTAAACGACTCCTAATTCGAATGCTCCGCGGAATTCTGTCTTTAC
TNCATTCCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTTTTGG
TGTGAGTGTGCATAGGTGTGCACATAGGGTGGAGGACAAATTAAGGGACT
GATCTGAGTACAGTATTTTGTTTATAATAGTAGTATTTTTTTTTGTTGTT
ATAGTAATATTCCACCACAGACCTGCATCCCTTTCTGTTTATGAGGTGGA
AATTTCTTTCTCTGTAGCTCAGGCTAGGACGGAACTCCCTATATATGAAC
CCAAGGCTGGCTTAGAACTTCATATTTTTTCAATATCCACATCGAAAGCG
TTAGCATCATATGGTTGTACCACCAGACCCATAATTCTAGATACTTTTAT
TTTGTTTTTTGATTCCCTTCCTTCTTCTCAGGCCCTTTTGACTTTCAGCC
TTTTGAAAAGTCCTGTGCACTCCCATATTTCCTCCTTAGAGATTTCACCT
TCTCCCGGAAAACATCTGTGCGCCCACTATTTCCTTCTCCTCGGTATTCC
TTATACCTCCCGCCCTCCCTATATTGCCACCCCATTCCCTCTTCTCACTT
TTTTGATTCCTTTCCATAACCCCTCATTTCCTCCATCTTTGCTCTAACAC
CCAAACCTCGCCCTTT

GCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCATCTCCAGGGATGCTGATTTAATTGTTCT
TTGGTAAAGCCTAGGCATCACGATTTCTGAAATCTCCCCTGATGATTATA
GTGTGAAAGCAAGGCTGAAAATCACTACTTCAGACTAAAATTAGGTCAGA
AATTTGAGAAGCAGCAGAGCAATGCTAGTTAATAAGAGTCCCCAGAGACT
AAAAGCTGATTGTGTTATCTGTTCTAAAAGGAGAAAATCTCTGTCCAGGA
AGATTAGGTCTTCTAAGAGGAGCTCTGTTCATGTTCCACAGGGAAGCAGT
AGCTATGAATGAATGAAATAGAACAGCTGCTCCTTTGCTTAGCATCTATC
TATTCATTATTTCTCTGAACATTATCCTATGACTTCCCAGAAGGCCTTGT
GACTGTTTTCATCCTGAGGCTTTGTCTGGTCCCTTCCTATTTGCTCTCAG
TAAAAGTTGCTCTATACTCCAAAATTAAGGAATCAAAACTTTTATCATAA
AGAAACCATAACAGGAATTACAGTGTCTGCAATATGTAGTGTTTGGCTTA
AGAAATACAATATTGCATAATTTGGTTACTTGCTGATTCAGNCATTTTGT
GTTGATATATAAAATACCTTAAGGNGGGACAAGTTGTCTTTTTAGTAGTG
CTATAGATCCAAGCCCAGGACTGGAAAAGGATCTTTTTATTCTCCCCAAT
GGAATTGTTATCTTGAAGAATT

Query= MSMg01no381_k11.g1 MSMg01no381_k11.g1 CHROMAT_FILE:
MSMg01no381_k11.g1 PHD_FILE: MSMg01no381_k11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:08 2005
         (565 letters)



>mm_chrX_85541021_85541985
          Length = 965

 Score = 1085 bits (561), Expect = 0.0
 Identities = 564/565 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   catctccagggatgctgatttaattgttctttggtaaagcctaggcatcacgatttctga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 catctccagggatgctgatttaattgttctttggtaaagcctaggcatcacgatttctga 812

                                                                       
Query: 61  aatctcccctgatgattatagtgtgaaagcaaggctgaaaatcactacttcagactaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 aatctcccctgatgattatagtgtgaaagcaaggctgaaaatcactacttcagactaaaa 752

                                                                       
Query: 121 ttaggtcagaaatttgagaagcagcagagcaatgctagttaataagagtccccagagact 180
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 751 ttaggtcagaaatttgagaagcagcagagcaatgctagttagtaagagtccccagagact 692

                                                                       
Query: 181 aaaagctgattgtgttatctgttctaaaaggagaaaatctctgtccaggaagattaggtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aaaagctgattgtgttatctgttctaaaaggagaaaatctctgtccaggaagattaggtc 632

                                                                       
Query: 241 ttctaagaggagctctgttcatgttccacagggaagcagtagctatgaatgaatgaaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ttctaagaggagctctgttcatgttccacagggaagcagtagctatgaatgaatgaaata 572

                                                                       
Query: 301 gaacagctgctcctttgcttagcatctatctattcattatttctctgaacattatcctat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gaacagctgctcctttgcttagcatctatctattcattatttctctgaacattatcctat 512

                                                                       
Query: 361 gacttcccagaaggccttgtgactgttttcatcctgaggctttgtctggtcccttcctat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gacttcccagaaggccttgtgactgttttcatcctgaggctttgtctggtcccttcctat 452

                                                                       
Query: 421 ttgctctcagtaaaagttgctctatactccaaaattaaggaatcaaaacttttatcataa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ttgctctcagtaaaagttgctctatactccaaaattaaggaatcaaaacttttatcataa 392

                                                                       
Query: 481 agaaaccataacaggaattacagtgtctgcaatatgtagtgtttggcttaagaaatacaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 agaaaccataacaggaattacagtgtctgcaatatgtagtgtttggcttaagaaatacaa 332

                                    
Query: 541 tattgcataatttggttacttgctg 565
           |||||||||||||||||||||||||
Sbjct: 331 tattgcataatttggttacttgctg 307


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space:   530025
Effective search space used:   530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)