TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CAAAACCTAGAATAGACTGATGTCTGAGCTCAAAGCAGTAAGGGAAGAGA
AATGTCCTCTTAACCTAATGACAAGAACAACAAAAATGTCAGGTTTTATT
TTCTTATCCAAGGCCTCAAGTGACTGGCCAAGGAAAACTCACATCAGGAA
AGAGAATATGTTTTACCCAGTGCACCAGTTCAAATGTTAATCTTATCTCA
AACACCCTCACTGGCACATTTAGAATCACGTTTGATCAAACGTTTGCTGC
AGTCAAAGCAATAAATAAAATTAACCATCACAACAGCAGACATGTGCCTC
TTCAGAATACATAATTGGATGCCCCCTTAGTTGGCTTCACCCATATTAAG
ATTGTATGGATAGCGAAGCTCTTGAGCATTGCCATTGGAAGAGGCAGTTA
ATACTTCCAGACACTCTTATTTTCTTCCACTCACGCTGTCCGTCCTTCGT
CCCACCAGAGTGGAAAGTTAATTGACTTCAAATATATTTTGCCCTGAGTA
ATAACTTGGAAATGTGCTTGCTTGCCTAAAAAGCTCATCTATGCTTTGGG
TTGGCCCAGTAAGACTGAACTCATACGTGCACATAATATTCTGTCAGCAA
CAACCTGGAAATAAACATGTAGGGGTCTAAACTTCCCAAGAAAGGGGCTA
GAGAAAAAAAATTCTGGGAATCCCAAAGGGCCGGGCGTCCCTTCCCCCTT
TTTTTTTTTCTTCC

TAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCTGTGTAGCTGTGTATCCCATTTTTAAAT
TGGGTTATTTGGATGGTTGGTTTCTAATTTCTTTATAAATTTTGGATATC
AACCCCCCTGTTAGATGTAGGGTTAATGAAGCTCTTTTCCCAGTCTGTGG
GATGCCATTTTGTCCTATTAAAAGTGTCCTTTTCAATGTCATGATGTCCC
ATTTATTGATTCTAGATCTTAGTGCTTGTGCTATTGGTGTTCTGTTCAAG
AAGTTGTCTCCTATATAAATGAGTTCAAGGCTATCACCCACTTTCTCTTC
TACCCAGTTCAGTGTATCTGGTTTTATGTTGAAGTTTTTGAACCACTTGG
ACTTGAGTTTTGTGCAGGTTGACAGATGGATCTGTTTGCATTCTTTCTTC
TACCTACAGACATAAGATTAGTACCACTGGTTGTAGGTGTTTTCTTTTTT
TTTCCCCCACGATATATTTCTGACTTCAGAAATCTTGTGTTTTTTAGGGT
GTGGATTTACTTCTGTCTTTTTTGACTCATTACCTTGACCATTGTTTTTG
GTTTTTATTTCTATGCGACGCTTTTTTTTATTATACACTCGCTTCTTTTC
TATGCCTAAACTTGGCTATATCTGTATTATCTTACCCCTTCTTTTTTTAC
AACCCGTTTATTCCTAACCCTTCTTGATTTTTTTACGGTATTATTACATA
TCTATCTTGTATTTTATATACTTCA

Query= MSMg01no383_c20.b1 MSMg01no383_c20.b1 CHROMAT_FILE:
MSMg01no383_c20.b1 PHD_FILE: MSMg01no383_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:09 2005
         (500 letters)



>mm_chrX_160075153_160076052
          Length = 900

 Score =  944 bits (488), Expect = 0.0
 Identities = 494/496 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaaacctagaatagactgatgtctgagctcaaagcagtaagggaagagaaatgt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaacctagaatagactgatgtctgagctcaaagcagtaagggaagagaaatgt 264

                                                                       
Query: 65  cctcttaacctaatgacaagaacaacaaaaatgtcaggttttattttcttatccaaggcc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctcttaacctaatgacaagaacaacaaaaatgtcaggttttattttcttatccaaggcc 324

                                                                       
Query: 125 tcaagtgactggccaaggaaaactcacatcaggaaagagaatatgttttacccagtgcac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaagtgactggccaaggaaaactcacatcaggaaagagaatatgttttacccagtgcac 384

                                                                       
Query: 185 cagttcaaatgttaatcttatctcaaacaccctcactggcacatttagaatcacgtttga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagttcaaatgttaatcttatctcaaacaccctcactggcacatttagaatcacgtttga 444

                                                                       
Query: 245 tcaaacgtttgctgcagtcaaagcaataaataaaattaaccatcacaacagcagacatgt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcaaacgtttgctgcagtcaaagcaataaataaaattaaccatcacaacagcagacatgt 504

                                                                       
Query: 305 gcctcttcagaatacataattggatgcccccttagttggcttcacccatattaagattgt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcctcttcagaatacataattggatgcccccttagttggcttcacccatattaagattgt 564

                                                                       
Query: 365 atggatagcgaagctcttgagcattgccattggaagaggcagttaatacttccagacact 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atggatagcgaagctcttgagcattgccattggaagaggcagttaatacttccagacact 624

                                                                       
Query: 425 cttattttcttccactcacgctgtccgtccttcgtcccaccagagtggaaagttaattga 484
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 625 cttattttcttccactcacgctgtccgtccttcttcccaccagagtggaaagttaattga 684

                           
Query: 485 cttcaaatatattttg 500
           ||| ||||||||||||
Sbjct: 685 ctttaaatatattttg 700


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space:   436100
Effective search space used:   436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)