XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TCTGTTTAAGTCTGTATCCCATTTTTAATTGGGTTATTTGGTTTTTGATA
TCTAGTTTCTTGAGTTATTTATGTATTTTGGATATTAGTCAGATGTGGAG
TTGGTGAAAATATTTTCCCATTCTGTATGTTGCTGCTTTGTCCTTTTGAT
GGTGTTCTTCGCCTTACAGAAGCTTTTCAGATTCGTGAGGTCCCATTTAT
TGATTGTTGTTCTTAGTGCCTGCACTAGTGTTCTGTTCAAAACGTTGTCT
GCTGAGACAATAAGTTCAAGACCATTCTCCACTTTCTCTTATACCTATCT
GGTGTATTCTGTGTAGCTCTTCAATGGATATGGTTTTATGTTGATGCTTT
TGATCCACTTGGACTTGAGTTTTGTGCAGCATGATAGATATGGATCTATC
TGTATTCTTCTACATGCAGATATCAGTTTGACCAGAATCATTTTTAAAGA
GGTTTTCCATTGTGTATTTCTGATATATACATACATATACATACATATAT
ACACATATATGTATATACCTATGTATATATATATATACATATACCCATAT
GTATATATACTTATACACACACATATATACATACACACACACACACACCC
ACCCNNCNCTANATATATATATATATACATATACATATATATACTCCTTA
TGAGGGGGGAATTACCCTTGGCCCCTTTTTTTTTATTTTATTTCTCCCCC
CAC

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAGGTACTTATAACTTGTATGGCAGGTATTTA
ACCTACAGAATCGCTGCCCCAACCCCAGGTATACATAGTTCTAAAAGATA
AGAATTGAATGAGCCCTCTAAAACTAAACTTTATTTAGTTCTGTTTGTAT
TTATACACATTTTTTTACTTCATGTTTTTGGCACCTATGTATATAATTCC
CTTAAGTTTATAAATATGTGTTTTTATTCTATTTCTGTCATATATACTTT
CCTTTGGGAGAATATTTTGAGCCTGAATTTTCTTCTTACCTTTGCTCTTG
CTTTTTACTTATTATTGGCACATTTCTAAATGTTTTTTTCCTGAATTAAA
ACTTTTTTATGACATTTATTTATTTTTAGTTTATTTGCATGGGTGTTTGG
CACACATGCATGTCTGTATACCACATGCATGCAGTGCTCACAAAGGCCAG
AAGATGGCGACAGGTACCTCTGGAACTGGAGTTGCAGATGGTTGTGAGCT
GCCATGTGGGAGAATTAACCCGACTCCTTGGAAAGAGCAATGCTCTTCAC
CACTGAAGCTTCTCTTCAGCCTCCTTTCGGAAAGATTCTTGGGCATTTTA
TTTTCAGGCTTTATTACTCCATGCATTTTTTTTCTCTAGGTAGCCATATC
TGGAATTTTATTTTTTTACTCTGGAAGGCCCCTTGGGAAAATCG

Query= MSMg01no383_h20.g1 MSMg01no383_h20.g1 CHROMAT_FILE:
MSMg01no383_h20.g1 PHD_FILE: MSMg01no383_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:33 2005
         (464 letters)



>mm_chrX_157047881_157048748
          Length = 868

 Score =  859 bits (444), Expect = 0.0
 Identities = 461/468 (98%), Gaps = 4/468 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggtacttataacttgtatggcaggtatttaacctacagaatcgctgccccaaccccagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aggtacttataacttgtatggcaggtatttaacctacagaatcgctgccccaaccccagg 494

                                                                       
Query: 61  tatacatagttctaaaagataagaattgaatgagccctctaaaactaaactttatttagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tatacatagttctaaaagataagaattgaatgagccctctaaaactaaactttatttagt 434

                                                                       
Query: 121 tctgtttgtatttatacaca-tttttttacttcatgtttttggcacctatgtatataatt 179
           ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tctgtttgtatttctacacagtttttttacttcatgtttttggcacctatgtatataatt 374

                                                                       
Query: 180 cccttaagtttataaatatgtgtttttattctatttctgtcatatatactttcctttggg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cccttaagtttataaatatgtgtttttattctatttctgtcatatatactttcctttggg 314

                                                                       
Query: 240 agaatattttgagcctgaattttcttcttacctttgctcttgctttttacttattattgg 299
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agaatattttgagcctgacttttcttcttacctttgctcttgctttttacttattattgg 254

                                                                       
Query: 300 cacatttctaaatg---tttttttcctgaattaaaacttttttatgacatttatttattt 356
           ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cacatttctaaatgttttttttttcctgaattaaaacttttttatgacatttatttattt 194

                                                                       
Query: 357 ttagtttatttgcatgggtgtttggcacacatgcatgtctgtataccacatgcatgcagt 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttagtttatttgcatgggtgtttggcacacatgcatgtctgtataccacatgcatgcagt 134

                                                           
Query: 417 gctcacaaaggccagaagatggcgacaggtacctctggaactggagtt 464
           |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 133 gctcacaaaggccagaagatggcgacaggtacctctggaattggagtt 86


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 868
Length adjustment: 10
Effective length of query: 454
Effective length of database: 858
Effective search space:   389532
Effective search space used:   389532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)