Query= MSMg01no385_b08.b1 MSMg01no385_b08.b1 CHROMAT_FILE:
MSMg01no385_b08.b1 PHD_FILE: MSMg01no385_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:33 2005
(542 letters)
>mm_chrX_82662043_82662983
Length = 941
Score = 1011 bits (523), Expect = 0.0
Identities = 535/539 (99%), Gaps = 3/539 (0%)
Strand = Plus / Plus
Query: 5 gaattctctcaaatctgaactttgttcttcaaaa-caaagtggtttgtggttcagactga 63
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattctctcaaatctgaactttgttcttcaaaaacaaagtggtttgtggttcagactga 264
Query: 64 attcctatctggtttagtatgtagtttccatcaccttcaataattacaaaacaatctcat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attcctatctggtttagtatgtagtttccatcaccttcaataattacaaaacaatctcat 324
Query: 124 caatgaaggtaattccagatttttaaaggctatactaattgttctgattcaaaatatctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caatgaaggtaattccagatttttaaaggctatactaattgttctgattcaaaatatctc 384
Query: 184 tctttttcttaaaagagaatgaaaattcttctttaggaatcagaaacttttaaaaccatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctttttcttaaaagagaatgaaaattcttctttaggaatcagaaacttttaaaaccatt 444
Query: 244 gaacttttcagaaaaaaaaaaaggctgtcggataaaatgtttattttatcttaatttctt 303
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaacttttcagaaaaaaaaaa-ggctgtcggataaaatgtttattttatcttaatttctt 503
Query: 304 tccatactcattgatctcactagttcaaagatataaaaacaaaactagatcaggaaaaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tccatactcattgatctcactagttcaaagatataaaaacaaaactagatcaggaaaaaa 563
Query: 364 aaaaccataaacgacagctactagagcacacagtaatttgtgggctacctctagtacaaa 423
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaa-ccataaacgacagctactagagcacacagtaatttgtgggctacctctagtacaaa 622
Query: 424 tgcttaccctggttttcattgacacagagcactaagtcatgattggttcattgtttgatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgcttaccctggttttcattgacacagagcactaagtcatgattggttcattgtttgatt 682
Query: 484 gatgtttaaaaagcaagtgcctgaggggaaatttgaaaattttttcttatcattgtacc 542
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gatgtttaaaaatcaagtgcctgaggggaaatttgaaaattttttcttatcattgtacc 741
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 941
Length adjustment: 10
Effective length of query: 532
Effective length of database: 931
Effective search space: 495292
Effective search space used: 495292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_b08.g1 MSMg01no385_b08.g1 CHROMAT_FILE:
MSMg01no385_b08.g1 PHD_FILE: MSMg01no385_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:33 2005
(536 letters)
>mm_chrX_82848365_82849301
Length = 937
Score = 590 bits (305), Expect = e-173
Identities = 317/321 (98%), Gaps = 2/321 (0%)
Strand = Plus / Minus
Query: 1 ttgaacaaagtaattagttgattttacaggttatatgaactgcagagctagagaagatgc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 ttgaacaaagtaattagttgattttacaggttatatgaactgcagcgctagagaagatgc 262
Query: 61 ccttttgtactgggattcttcatgtc-ttttttttttccagtgcttatattttattcact 119
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ccttttgtactgggattcttcatgtctttttttttttccagtgcttatattttattcact 202
Query: 120 attctattaaaaacagatttttcatacactctattctgatcaaagtttcccatcccccaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctattaaaaacagatttttcatacactctattctgatcaaagtttcccatcccccaa 142
Query: 180 ttccttttcccctccccatccagcaaaatctataatcctttaatattctcattagaacac 239
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ttcctttccccctccccatccagcaaaatctataatcctttaatattctcattagaacac 82
Query: 240 gaataggtaacttg-aaaaaaaaagcaagaaaaaaagagccaaagaaaagggacgagaaa 298
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gaataggtaacttgaaaaaaaaaagcaagaaaaaaagagccaaagaaaagggacgagaaa 22
Query: 299 catacagatgtacacacactt 319
|||||||||||||||||||||
Sbjct: 21 catacagatgtacacacactt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 937
Length adjustment: 10
Effective length of query: 526
Effective length of database: 927
Effective search space: 487602
Effective search space used: 487602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
