TXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTATTCAGTTCT
GAGCCCCATTTTTTAATGGGGTTATTTACTTTTCTGGAGTCCACCGTATT
GAGTTCTTTTTTTTTAACATTTTTAATTGCATATTTTCCTCAATTACATT
TAGAATGCTATCCCAAAAGTCCCCCATACCCCCCCCCACTCTGCTACTCA
CCCATTCCCACTTTTTGGCCCTGGCATTCCCTTGTACTGGGGCATATAAT
GTTTGCATGTCCAACCGGCCTCTCTTTCCTGTGATGGTTTACCAGGCCAT
CTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGTTACTGGTTAGT
TCATAATGTTGTTGCACCTACAGGGTTGCAGATCTCTTTAGCTCCTTGGA
TACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCTAATAGCTG
ACTGTGAGCATCACCTTATGTGTTTGCTAGGCCCTGGCCTTTATATATAT
TGGATATTAGTCCCATATCTGATTTAGGATAGGGAAAGTTCCTTTCCCAA
TCTGTTGGTGGTCTTTTTGTCTTATTGATGGTGTCTTTTGCCTTGCAGAA
TCTTTGTAACTTTAGAGGTCCCATTTTTCCTTTTTGTTTCTTAAGCTAAA
ATCTTTGCTGGTACATTCAGGATTTTGTCCCCACCTTCTTTACTTCTGGG
TTTTAGTTCATATCTCGCTTTAATATTTCAAGATATCTGTGCTAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXACATTGAAGTTCGTTCAATTTTTACTGTGTCCTTGGTTATTTA
GTTTAGACTGTTTTTCTTACTAACATGAAATTTTAGATGCTTTATATTTT
GATGTTTAGAGTGCAAAGTTTATTAGGTTTTATTGGAAAATAAATTTCTG
GGCATTCTTGTATCTTATCTCACCCCAAAACCCAAATAACTTTTTTTTTC
CAAATAACTTTTTTGAATATTGTTTTTCATCAATGAGGTAGGCAATGTTT
TCAGAATGCAGCTATAGTTGTGTCAAATAATTTGCAGATTTGTTTTTATT
TTTTGGGTGTTTTTTTTTAACTCTTTAAAAGCAGAAGCCAGAACAGAACA
AAGATGACATGTAAAGATCTAACAACGCATCTCAGGAAAGTTATCTGCTG
TGGAAAGCCAGGATTTGCTTTTTGTAATAACCTATCTTCAAGGACAATAA
TTCTATACAAAAAAGGGACCATTTGCTTAGTAATCCTGCAAAGAATGTAA
AGTGTAATTATAGTTTTATCAGCAAGACAGGACAGTCTTCAAAAAAATTT
TAAAGTAACAAGAGGCTTCTTTTTGGTTTTGTGATTCATGGTATCCTCTA
CAAGCTGTTAACCTGCAATTATCTATAAGTACATGCATATGTAAAGAATA
TACTGCTGCAAAAAACCTCTTGAAAATGAAATGCTCCCAAGCATATAATA
CAA

Query= MSMg01no385_f01.g1 MSMg01no385_f01.g1 CHROMAT_FILE:
MSMg01no385_f01.g1 PHD_FILE: MSMg01no385_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:51 2005
         (579 letters)



>mm_chrX_65322214_65323193
          Length = 980

 Score = 1083 bits (560), Expect = 0.0
 Identities = 575/580 (99%), Gaps = 1/580 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acattgaagttcgttcaatttttactgtgtccttggttatttagtttagactgtttttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acattgaagttcgttcaatttttactgtgtccttggttatttagtttagactgtttttct 260

                                                                       
Query: 61  tactaacatgaaattttagatgctttatattttgatgtttagagtgcaaagtttattagg 120
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tactaacataaaattttagatgctttatattttgatgtttagagtgcaaagtttattagg 320

                                                                       
Query: 121 ttttattggaaaataaatttctgggcattcttgtatcttatctcaccccaaaacccaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttattggaaaataaatttctgggcattcttgtatcttatctcaccccaaaacccaaat 380

                                                                       
Query: 181 aactttttttttccaaataacttttttgaatattgtttttcatcaatgaggtaggcaatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aactttttttttccaaataacttttttgaatattgtttttcatcaatgaggtaggcaatg 440

                                                                       
Query: 241 ttttcagaatgcagctatagttgtgtcaaataatttgcagatttgtttttattttttggg 300
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 ttttcagaatgcagctatagttgtgtcaaataatttgcagatttgtttttgttttttggg 500

                                                                       
Query: 301 tgttttttttt-aactctttaaaagcagaagccagaacagaacaaagatgacatgtaaag 359
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgttttttttttaactctttaaaagcagaagccagaacagaacaaagatgacatgtaaag 560

                                                                       
Query: 360 atctaacaacgcatctcaggaaagttatctgctgtggaaagccaggatttgctttttgta 419
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atctaacaacgcatcacaggaaagttatctgctgtggaaagccaggatttgctttttgta 620

                                                                       
Query: 420 ataacctatcttcaaggacaataattctatacaaaaaagggaccatttgcttagtaatcc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataacctatcttcaaggacaataattctatacaaaaaagggaccatttgcttagtaatcc 680

                                                                       
Query: 480 tgcaaagaatgtaaagtgtaattatagttttatcagcaagacaggacagtcttcaaaaaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgcaaagaatgtaaagtgtaattatagttttatcagcaagacaggacagtcttcaaaaaa 740

                                                   
Query: 540 attttaaagtaacaagaggcttctttttggttttgtgatt 579
           ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 741 attttaaggtaacaagaggcttctttttggttttgtgatt 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 980
Length adjustment: 10
Effective length of query: 569
Effective length of database: 970
Effective search space:   551930
Effective search space used:   551930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)