Query= MSMg01no385_f11.b1 MSMg01no385_f11.b1 CHROMAT_FILE:
MSMg01no385_f11.b1 PHD_FILE: MSMg01no385_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:53 2005
(558 letters)
>mm_chrX_85177664_85178621
Length = 958
Score = 1064 bits (550), Expect = 0.0
Identities = 556/558 (99%)
Strand = Plus / Plus
Query: 1 tatgattaggaagtgctgacaggagcacacagtaaccaattttcagtgtcattatagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgattaggaagtgctgacaggagcacacagtaaccaattttcagtgtcattatagtgc 260
Query: 61 ttggaaagagccagttctaaaatagctactatccaagcagcagatgcgtttgtggatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggaaagagccagttctaaaatagctactatccaagcagcagatgcgtttgtggatcaa 320
Query: 121 catattgacttttatataatacaaagtaaagatcaaagtgcataaaatcaatgaagtcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catattgacttttatataatacaaagtaaagatcaaagtgcataaaatcaatgaagtcaa 380
Query: 181 gatgatgaaaaccagagttttgtgtaactagacctgtaataagaattcaaaataaattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgatgaaaaccagagttttgtgtaactagacctgtaataagaattcaaaataaattgt 440
Query: 241 gtttcatcttaccaacattcaactgtaggtgaataattcaaatccacataaaatgtttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttcatcttaccaacattcaactgtaggtgaataattcaaatccacataaaatgtttaa 500
Query: 301 tacaatgggcactagagaaatcagagtttagtatgtctttataaatatgataagtcaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacaatgggcactagagaaatcagagtttagtatgtctttataaatatgataagtcaaaa 560
Query: 361 cactaaaaggaattattacaacccattaagatagcctatgtaaaacaaacacaggctcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cactaaaaggaattattacaacccattaagatagcctatgtaaaacaaacacaggctcac 620
Query: 421 atacacgtatatttgtatcatgcagattgatagtattcatttaatcaaaattttcactga 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 atacacgtatatttgtatcatgcagattgatagtattcatttaatcaaaatcttcactga 680
Query: 481 gtcttaatccttttggagtattaaaattcagctcataattagtgatttttattaatattt 540
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtcttaatccttctggagtattaaaattcagctcataattagtgatttttattaatattt 740
Query: 541 ctctcctaaagtttagtt 558
||||||||||||||||||
Sbjct: 741 ctctcctaaagtttagtt 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_f11.g1 MSMg01no385_f11.g1 CHROMAT_FILE:
MSMg01no385_f11.g1 PHD_FILE: MSMg01no385_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:53 2005
(527 letters)
>mm_chrX_85344238_85345163
Length = 926
Score = 1004 bits (519), Expect = 0.0
Identities = 525/527 (99%), Gaps = 1/527 (0%)
Strand = Plus / Minus
Query: 1 ttaggggaggggacatttggaaagcatatagttggcagtgctttacaaagtaggtgatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ttaggggaggggacatttggaaagcatatagttggcagtgctttacaaagtaggtgatgg 667
Query: 61 gaaccctctttattatagtgtttttggatatcctatattacaaaaagagagcagctagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gaaccctctttattatagtgtttttggatatcctatattacaaaaagagagcagctagta 607
Query: 121 acattctttagattcactgtacttcagaggtgattttctatccttatctcacttgacctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 acattctttagattcactgtacttcagaggtgattttctatccttatctcacttgacctg 547
Query: 181 tgagaagtgtttttgcattggataatgtcttctcctggtatacttatgttatgtggtatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgagaagtgtttttgcattggataatgtcttctcctggtatacttatgttatgtggtatt 487
Query: 241 caagttttttttttcctcttgctatcagaaaacacagggaacaaaaacaacttgtggaga 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 caag-tttttttttcctcttgctatcagaaaacacagggaacaaaaacaacttgtggaga 428
Query: 301 aaagagtttgtttttcttacacattattgaggaggaaaatcaaggcaggaattcaaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aaagagtttgtttttcttacacattattgaggaggaaaatcaaggcaggaattcaaagaa 368
Query: 361 gaaagcatgtttcatgatacatacatacatgtatgtatattcctagacctaggtaatgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gaaagcatgtttcatgatacatacatacatgtatgtatattcctagacctaggtaatgtg 308
Query: 421 ggccctctaacaccaattagaaaaccaagagagtcccccacagacatgcccacatttgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggccctctaacaccaattagaaaaccaagagagtcccccacagacatgcccacatttgtc 248
Query: 481 aacttgacaaaggcaaatgttgtacaaacaagactcttttatgtaat 527
|||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 247 aacttgacaaaggcaattgttgtacaaacaagactcttttatgtaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 926
Length adjustment: 10
Effective length of query: 517
Effective length of database: 916
Effective search space: 473572
Effective search space used: 473572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
