Query= MSMg01no385_n22.b1 MSMg01no385_n22.b1 CHROMAT_FILE:
MSMg01no385_n22.b1 PHD_FILE: MSMg01no385_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:33 2005
(522 letters)
>mm_chrX_97382150_97383071
Length = 922
Score = 930 bits (481), Expect = 0.0
Identities = 503/519 (96%), Gaps = 14/519 (2%)
Strand = Plus / Minus
Query: 4 ggaattctctcagctactcctcaatctaggcaattaccactttttccttcagactgctag 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ggaattctctcagctacttctcaatctaggcaattaccactttttccttcagactgctag 552
Query: 64 gtaatcataaaacctcttttagcatcttattacaaactttcttggcaccatagcatccct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gtaatcataaaacctcttttagcatcttattacaaactttcttggcaccatagcatccct 492
Query: 124 tttgtagcatgttaacagtattgatatttttagatatatttgtggtgtattttttctgca 183
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Sbjct: 491 tttgtagcatgttaacagtattgatatttttagatatatttgtggtgtattttttctgca 432
Query: 184 accataccctttagtatataagtggaaaatccaactgagctccttggcaccttgcatatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 accataccctttagtatataagtggaaaatccaactgagctccttggcaccttgcatatt 372
Query: 244 ttaacttttaaacaaatatttgatgaaagaataaatatataatggtacttaaatataaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttaacttttaaacaaatatttgatgaaagaataaatatataatggtacttaaatataaag 312
Query: 304 aatataaatctacattaagaatcccaatgtcatatgctctctgctgtgcacagaaaaagt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aatataaatctacattaagaatcccaatgtcatatgctctctgctgtgcacagaaaaagt 252
Query: 364 caagactatttattcagaaaatattatttccacaggtatgctgtaggatctctctctctt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 caagactatttattcagaaaatattatttccacaggtatgctgtaggatctctctctctt 192
Query: 424 tctctctctctctctctctctctctctcacacacacacacacacacacacacacacacac 483
|||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 191 tctctctctctctctctctctctctctcacacacacacacacacacacacgcac------ 138
Query: 484 acacacacgcacatgcacacacacactcacacacactca 522
|||||||||||||||||||||||||||||||
Sbjct: 137 --------gcacatgcacacacacactcacacacactca 107
Score = 70.3 bits (36), Expect = 3e-16
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 412 tctctctctctttctctctctctctctctctctctctctc 451
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 44 tctctctctctctctctctctctctctctctctctctctc 83
Score = 70.3 bits (36), Expect = 3e-16
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 412 tctctctctctttctctctctctctctctctctctctctc 451
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 46 tctctctctctctctctctctctctctctctctctctctc 85
Score = 70.3 bits (36), Expect = 3e-16
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 412 tctctctctctttctctctctctctctctctctctctctc 451
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 48 tctctctctctctctctctctctctctctctctctctctc 87
Score = 70.3 bits (36), Expect = 3e-16
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 412 tctctctctctttctctctctctctctctctctctctctc 451
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 50 tctctctctctctctctctctctctctctctctctctctc 89
Score = 70.3 bits (36), Expect = 3e-16
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 412 tctctctctctttctctctctctctctctctctctctctc 451
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 52 tctctctctctctctctctctctctctctctctctctctc 91
Score = 68.4 bits (35), Expect = 1e-15
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 413 ctctctctctttctctctctctctctctctctctctctc 451
|||||||||| ||||||||||||||||||||||||||||
Sbjct: 43 ctctctctctctctctctctctctctctctctctctctc 81
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 92
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 8
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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