TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATGCCGAGCTGGGCGGA
ATTCTTTCATGCTTTCGAAAAAACTGTGATATGCAAAGGCTTTACCACAT
TGATTACACTCATAAGGTTTCTCTCCAGTATGTGTTCTTTTATGTATTTG
GAGGTCACTGTGAGTTACAAAAGCTTTACCACATTGATTACATTCATAGG
GTTTCTCTCCTGTATGAATTCTTTCATGCCTTTGAAGATTACTGTGATGT
GCATAGGCTTTACCACAATGGTTACATCCATAGGGTTTCTCTCCAGTATG
AATTCTTTCATGCCTTTGTTTGATACTCCAATACACAAAAGCTTTACCAC
AATGAGTATATTGATAGGGTTTCTCTCCAGGATGACTTGTTTCATGCCTG
TGAAGATAATTGGCACATGTGAAAGCTTTACCATATTCATTACACTGATG
AATCATTTTACACGTATGAATAAATTTTACAATTTTATCTAATCATAAAG
AAGAATCAGATCTTAAGGTTTTATCATGGCGTTCTCCTTCATTATGGGTT
GTTTTACATTTTTGATGATACCTATAATGAATATACCTAGAAATAGCATT
TACATGGCTCACATTTATAGCATTTTTTTGTATTGTTCTCTTTTTTTAAT
TAATATTTTTTATTACATATTTTCCTCAATTACATTTCCAATGCTATCCC
AAAAGTCCCCCATACCCTCCCCCCCACTTTCCTACCCACTCATTCCCATT
T

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTGAGGTTTCTGGGATGAGACCAATTCCCAGTTT
TGCCTGCAATTATACCAAAGTTAATATTCCTCCTGGATTACTCATTCCTT
TTCTTACTTTGGATTTTTGTCATTCAGTCAGAAAATTATTATTTTTTGGA
GTGGTGCTACTTATATTTAAGGAAGCACTACTTGACCATAAATGTGAGTT
AGATACCCCTCATATGTGTCCATGTGGCTCACTGCGTGGACATATACAGC
ATCATTTATCACAGTGTTCTTTAATATTTTATATGAAGGAACAGTAAGTA
AATAGCAAGATTATATATACAGAAATTCATTTTTTACATTTGTGCATTGA
CTAGGGTCTGATATGTAGTAGGACTTTTATAGAAAAATTTGCAATCATAC
TCCTAACATTCAACTAGTATATTTCTTAAAGGAGGCTAGAGACAAAACAA
AACAAAACCCCTAGTATTTATTATCAGTGTTCATTTTCGAGTGGTATAGC
CTACTTCTTTACTTATTTCTCACATTTAAAACATCAGTGCATAACCCACT
GAAGACAATGCAGTAATGGAGAGTTATCTGCTGACATAATTTCTTTTTTT
TTTTTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGG
CTGTCCTGGAGCTCACTTTGTAGACCAGGCTGGCCTCGAACTCAG

Query= MSMg01no386_e20.g1 MSMg01no386_e20.g1 CHROMAT_FILE:
MSMg01no386_e20.g1 PHD_FILE: MSMg01no386_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:05 2005
         (602 letters)



>mm_chrX_37839964_37840968
          Length = 1005

 Score =  456 bits (236), Expect = e-132
 Identities = 516/658 (78%), Gaps = 91/658 (13%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgaggtttctgggatgagaccaattcccagttttgcctgcaattataccaaagttaata 60
           ||||||||||||||||||||||||||| ||||||||| ||||| |||| || ||||||||
Sbjct: 776 ttgaggtttctgggatgagaccaattctcagttttgcttgcaaatatatcagagttaata 717

                                                                       
Query: 61  ttc-----------------ctcctggattactcattcctttt-cttactttggattttt 102
           |||                 |||||||||| |||||| ||||| | ||||||||||||||
Sbjct: 716 ttcctccacaactgctgatactcctggattgctcatt-cttttacctactttggattttt 658

                                                                       
Query: 103 g------------tcattcagtcagaaaattattattttttggagtggtgctactt---- 146
           |            ||||||||||||||||||||||||||||||| | |||||||||    
Sbjct: 657 gtcaactttgtactcattcagtcagaaaattattattttttggacttgtgctacttataa 598

                                                                       
Query: 147 -atatttaaggaagcactacttgaccataaatgtgagttagatacccctcatatgtgtcc 205
            |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||| |
Sbjct: 597 gatatttaaggaaccactacttgaccataaatgagagttagatacccctaatatgtgtac 538

                                                                       
Query: 206 atgtggctcactgcgtggacatatacagcatcatttatcacagtg--ttctttaatattt 263
           ||||||| |||||| |||||||||| ||||||| |||||||||||  |||  ||||||||
Sbjct: 537 atgtggcacactgcatggacatataaagcatcacttatcacagtgtattc--taatattt 480

                                                                       
Query: 264 tatatgaaggaacagtaagtaaatagcaagattatatatacagaaattcat--ttttta- 320
           ||||||||| |||| |||||||||||||||||||||    || ||||| ||  |||||| 
Sbjct: 479 tatatgaagaaaca-taagtaaatagcaagattata---cca-aaatttattatttttag 425

                                                                       
Query: 321 -catttgtgcattgactagggtctgatatgtagtaggacttttatagaaaaa---tttgc 376
            |  |||||| |||| ||||| |||||| |||||||| |||| ||  |||||   ||| |
Sbjct: 424 cc--ttgtgccttgaatagggcctgatacgtagtaggcctttcat--aaaaatttttttc 369

                                                                       
Query: 377 aatcatactcctaacattcaactagtatatttcttaaaggaggctagagacaaaacaaaa 436
           ||||| ||||||||||||||| | ||||| |||||||| |||||||||||||||| ||||
Sbjct: 368 aatcagactcctaacattcaattggtatacttcttaaaagaggctagagacaaaaaaaaa 309

                                                                       
Query: 437 caa---------------------------------aacccctagtatttattatcagtg 463
            ||                                 || |||||||||||||||||||||
Sbjct: 308 aaaaaaaaaaaaaaaagaagaagaagaagaagaaagaaaccctagtatttattatcagtg 249

                                                                       
Query: 464 ttcattttcgagtggtatagcctacttctttacttatttctcacatttaaaacatcagtg 523
           ||||||||| ||| |||||  |||| ||||| ||||||||| |||||||||||||||| |
Sbjct: 248 ttcattttcaagttgtatattctacctcttttcttatttctaacatttaaaacatcagcg 189

                                                                     
Query: 524 cataacccactgaagacaatgcagtaatggagagttatctgctgacata-atttcttt 580
           ||||||  |||  || ||||| ||||||||||| ||||||| ||||||| ||| ||||
Sbjct: 188 cataacatacttcaggcaatgtagtaatggagaattatctgttgacatacatt-cttt 132


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1005
Length adjustment: 10
Effective length of query: 592
Effective length of database: 995
Effective search space:   589040
Effective search space used:   589040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)