TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTATTTATATCCGTACTGCATTTTTGAATGGGTTATATATTTTCTTG
ATATCTAAGGTATTCTGTTCTTTATATGTTTTGGATATTAGACATGTATC
AGATGTGGAGTTTATAAAAATCTTTTTCCATTCTTTGGCTGCTGCTTTTC
CAATGAAAGTGCTCTTTGTTATACAGAAGCTTTTCAGTTTCATGAAGTCT
CATTTATCAACTGTTGATTTTAGTGCATTTTTTGATGCTGTTCTGTTCAG
GAAGTCTTCCTTTTCCAATGATTTCAAGACTATTGCTCACTTTCCTTTCT
ATTAAGTTCAGTGCTGTTGGTTTTATGCTCTATTTCTTGACCTTTTTGAG
TTTTGTGTAGGGTGATAATACAGATTAATCTACATTCAGTTATCAGGTTG
ACCAACTTGATTTGTTGAAGTTGCTGGTTTATTCCAGTGAGTAACTCTGG
CTTACTTATAAAAATTCATGTGCCCATGGGTATATGGATTTATGTCTTTG
TCTTCAATTCAGTTCCATTGATTGATATGTCTGTTTTTGTGCCTGTTCAA
TCCAGTTTTCATTTCTATATATCTGATATCTGTAGTACAACTTANAATTG
AGAATGGAGATACTGCCAACAGTTTTTTTTAATTATTATTCTGGAATTTT
TTTACAACTATCCAGGGTTTCCATTTG

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTGAGATAATTATTTTACACACACACT
TAAATGCACGTAATTACCTGTGCTCATGCACATCCATACACAAGTTTACA
TGTATTCCACAAGAGCAATAACTATACAAATATGCATAATTAAATTATGT
CAGTGTATTTCGAAAGTCAGAGAAAATAAGATTAATATAAACAAAATAAT
TAGGTTTAGTATAATTTTTGCATGGATATAATATAAACTGTTTTAGTCTT
TGAAATTAAATTTATAGTTTGTTTTTCATTCTTATATAGCTTGAAAATAT
AATAAAGCCATCTTCAAACTTTAAATAGACTAGAAAATTTCTCACATATA
TTCCAATACATAATGAAAACAATGTCATTTAATGGCTTAATATTAAGGAC
AAAAATCAACATATTTAATAAAAAATCAACTGTTTTGTTTATAATACTAA
TTGTCTTACAAAATCTGTATGACATATACACAGTTTAGAAATTAATCCTA
GTGGTCATTCCTGAGTGTGTATATGTACTGAGCTTTACTAGTATGGGTTT
ACTGCATATAAATTAAAAAATTGTGTACTGTGGGATGATGAGATGACCTA
GCAGTTAAGAGCACTTGTTGCTTGACTAGAGGACCTGAGTTTGATTGTAA
GAAGGCATCTCTGAACCATGCAACTCCAGTTCCA

Query= MSMg01no386_n09.g1 MSMg01no386_n09.g1 CHROMAT_FILE:
MSMg01no386_n09.g1 PHD_FILE: MSMg01no386_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:44 2005
         (661 letters)



>mm_chrX_111051505_111052564
          Length = 1060

 Score = 1216 bits (629), Expect = 0.0
 Identities = 653/661 (98%), Gaps = 1/661 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgagataattattttacacacacacttaaatgcacgtaattacctgtgctcatgcacat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgagataattattttacacacacacttaaatgcacgtaattacctgtgctcatgcacat 260

                                                                       
Query: 61  ccatacacaagtttacatgtattccacaagagcaataactatacaaatatgcataattaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatacacaagtttacatgtattccacaagagcaataactatacaaatatgcataattaa 320

                                                                       
Query: 121 attatgtcagtgtatttcgaaagtcagagaaaataagattaatataaacaaaataattag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attatgtcagtgtatttcgaaagtcagagaaaataagattaatataaacaaaataattag 380

                                                                       
Query: 181 gtttagtataatttttgcatggatataatataaactgttttagtctttgaaattaaattt 240
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 gtttagtataatttttgcatggatataatataaaccgttttagtctttgaaattaaattt 440

                                                                       
Query: 241 atagtttgtttttcattcttatatagcttgaaaatataataaagccatcttcaaacttta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atagtttgtttttcattcttatatagcttgaaaatataataaagccatcttcaaacttta 500

                                                                       
Query: 301 aatagactagaaaatttctcacatatattccaatacataatgaaaacaatgtcatttaat 360
           |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 501 aatagactaggaaatttctcacataaattccagtacataatgaaaacaatgtcatttaat 560

                                                                       
Query: 361 ggcttaatattaaggacaaaaatcaacatatttaataaaaaatcaactgttttgtttata 420
           ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 561 ggcttaatattaaggacaaaa-tcaacttatttaataaaaaatcaactgttttgtttata 619

                                                                       
Query: 421 atactaattgtcttacaaaatctgtatgacatatacacagtttagaaattaatcctagtg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atactaattgtcttacaaaatctgtatgacatatacacagtttagaaattaatcctagtg 679

                                                                       
Query: 481 gtcattcctgagtgtgtatatgtactgagctttactagtatgggtttactgcatataaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtcattcctgagtgtgtatatgtactgagctttactagtatgggtttactgcatataaat 739

                                                                       
Query: 541 taaaaaattgtgtactgtgggatgatgagatgacctagcagttaagagcacttgttgctt 600
           ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 740 taaaaaattgtgtactgggggatgatgagatgacttagcagttaagagcacttgttgctt 799

                                                                       
Query: 601 gactagaggacctgagtttgattgtaagaaggcatctctgaaccatgcaactccagttcc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gactagaggacctgagtttgattgtaagaaggcatctctgaaccatgcaactccagttcc 859

            
Query: 661 a 661
           |
Sbjct: 860 a 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1060
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1050
Effective search space:   683550
Effective search space used:   683550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)