NCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT
TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC
CTACCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT
TTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA
TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTT
CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCAC
TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGA
TCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCCC
ATTCTTCTACACGATAACAACCAGTTGTGCCCGCACCAATTGTTGAAAAT
GCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCTAAGATCACCC
GACCCCACCTGTATGCCGTTCTTTTCTGGCCCTCAATCTCCCTTCCCCCG
GGTCTCCCTGTCCTGCCCTTATACCCTGTACCATCGCTGTTTTTCCATCC
CTACTCGTCCCTGCCCTTCCCAGCCCGCCCGTCTCGGCATGCCTGTTTCT
CCCCCCTTTACGCCCTCTCTCTTATTCCCCCGCCGAACGGACCTCTTTCC
CTGGTGTCCCCGACCTTTTTTTT

NNCCGATGATAGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGCTGGGTGTGGATAACTCT
CTGGCTCAAAAGCACTGGCTCTGAGTGCTAGCCCACAGCCCCCATATATC
TCGCCCATGGATCAGTCTTTCACTGCTGACCCATAGCATAGATTTTCACC
TCCTTCTCCCTCATTTGTGGCCTGCTGCAGCCACTAGTTAACTGTTCACC
TGAAAAGCAGGTCTGGCCTCACTTCCTGCTGGGGATACTACTTGCTACCT
TCTGTCATATGCTCCTTAGCTCTGCTCCAGGTTCTCTACCTGAAAAGTGA
GTCTGTCCCCACCCCTTATATCCTGCCAGGGACCCTGTTGGAGACTTGCT
TTCCCATGTGTGCAACTGAAAGAAAGAAAACTAAATTCAAGATTTCAAAG
CCCTAGCCACAAAATTTATTCAAGGTCCATAACTCATGTGGCTTGCTAGT
TAGTANGGCTTTTTGGGCTTAGAGCAAAGAACAAAGGCTGTAAAGTCATC
CCAGGAAACAACTAGCCCTAAAGATAGGGAAGACTACCCCAATGTTGGGA
CTGGCCCGGGGCCTCCCTACGTCCAGCCCTTCTGAACCTAATTAATATTA
TCCGAAGGTCTGGTGGTACCTCGAACTGGATGGACAAGCTGCTGAATTTT
TAATGGACCACTCATGGGGAACCTGGCCCCATCCTCCCCGGCGGGAGGGT
AAAGAAACCCCCCTGGGG

Query= MSMg01no387_i19.g1 MSMg01no387_i19.g1 CHROMAT_FILE:
MSMg01no387_i19.g1 PHD_FILE: MSMg01no387_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:38 2005
         (443 letters)



>mm_chrX_18400142_18400984
          Length = 843

 Score =  820 bits (424), Expect = 0.0
 Identities = 438/443 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggctgggtgtggataactctctggctcaaaagcactggctctgagtgctagcccacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggctgggtgtggataactctctggctcaaaagcactggctctgagtgctagcccacag 260

                                                                       
Query: 61  cccccatatatctcgcccatggatcagtctttcactgctgacccatagcatagattttca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccccatatatctcgcccatggatcagtctttcactgctgacccatagcatagattttca 320

                                                                       
Query: 121 cctccttctccctcatttgtggcctgctgcagccactagttaactgttcacctgaaaagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctccttctccctcatttgtggcctgctgcagccactagttaactgttcacctgaaaagc 380

                                                                       
Query: 181 aggtctggcctcacttcctgctggggatactacttgctaccttctgtcatatgctcctta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtctggcctcacttcctgctggggatactacttgctaccttctgtcatatgctcctta 440

                                                                       
Query: 241 gctctgctccaggttctctacctgaaaagtgagtctgtccccaccccttatatcctgcca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctctgctccaggttctctacctgaaaagtgagtctgtccccaccccttatatcctgcca 500

                                                                       
Query: 301 gggaccctgttggagacttgctttcccatgtgtgcaactgaaagaaagaaaactaaattc 360
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 gggaccctgttggagacttgctttcccatgtgtgcaattgaaagaaagaaaactaaattc 560

                                                                       
Query: 361 aagatttcaaagccctagccacaaaatttattcaaggtccataactcatgtggcttgcta 420
           |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 aagacttcaaagccctagccacaaaatttattcaaggtccatgactcatgtggcttgcta 620

                                  
Query: 421 gttagtanggctttttgggctta 443
           ||||| | |||||||||||||||
Sbjct: 621 gttagaagggctttttgggctta 643


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space:   360689
Effective search space used:   360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)