Query= MSMg01no387_n22.b1 MSMg01no387_n22.b1 CHROMAT_FILE:
MSMg01no387_n22.b1 PHD_FILE: MSMg01no387_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:03 2005
(387 letters)
>mm_chrX_140289012_140289799
Length = 788
Score = 555 bits (287), Expect = e-162
Identities = 308/317 (97%), Gaps = 6/317 (1%)
Strand = Plus / Minus
Query: 11 gaattctagtttgttccc--atggtaggttagcctaaacgaatgaagaaaaggagaaatg 68
||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gaattctagtttg-tcacaaatggtaggttagcctaaacgaatgaagaaaaggagaaatg 258
Query: 69 gatatggattgagttggaaaacccagatatttgatatttgaaaggag---ttttttttat 125
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 257 gatatggattgagttggaaaacccagatatttgatatttgaaaggaggttttttttttat 198
Query: 126 tacgtattttcctcaattacatttccaatgctatcccaaaagtcccccatgccctacccc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tacgtattttcctcaattacatttccaatgctatcccaaaagtcccccatgccctacccc 138
Query: 186 caaatcccctacccacccattcctactttctggccctggggccctatactggggcatata 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 caaatcccctacccacccattcctactttctggccctggggccctatactggggcatata 78
Query: 246 acgtttgcgtgtccaatgggcctctctttccagtgatggcttactaagccatcttttgat 305
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 aagtttgtgtgtccaatgggcctctctttccagtgatggcttactaagccatcttttgat 18
Query: 306 acatatgcagctagagt 322
|||||||||||||||||
Sbjct: 17 acatatgcagctagagt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 788
Length adjustment: 9
Effective length of query: 378
Effective length of database: 779
Effective search space: 294462
Effective search space used: 294462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_n22.g1 MSMg01no387_n22.g1 CHROMAT_FILE:
MSMg01no387_n22.g1 PHD_FILE: MSMg01no387_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:03 2005
(465 letters)
>mm_chrX_140102740_140103602
Length = 863
Score = 880 bits (455), Expect = 0.0
Identities = 462/465 (99%), Gaps = 2/465 (0%)
Strand = Plus / Plus
Query: 1 tttggaattctgcaccctaagcagaccactatctctgacagcacaatatcgccccctagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttggaattctgcaccctaagcagaccactatctctgacagcacaatatcgccccctagt 260
Query: 61 gaccgcactggaaacatttttctcagctcttgattgctatcccatgatctccatcaaggg 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaccacactggaaacatttttctcagctcttgattgctatcccatgatctccatcaaggg 320
Query: 121 tgccagtattcttacattgctctcactcctggcaagcaaaggcacattccttctatcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgccagtattcttacattgctctcactcctggcaagcaaaggcacattccttctatcaag 380
Query: 181 actgaaggagtaagtcagggatgtgcagcctcctttagagcattcttctccagtgtgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgaaggagtaagtcagggatgtgcagcctcctttagagcattcttctccagtgtgagt 440
Query: 241 gggtttaaagggaggggtaccactctcttctcccttgtatgtttttttttcttcttcttc 300
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 gggtttaaagggaggggtaccactctcttctcccttgtatgttttttttt--tcttcttc 498
Query: 301 ttctttgggcctgaaaaagaaaccaggagtccagaaatatttagtgctacataagacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttctttgggcctgaaaaagaaaccaggagtccagaaatatttagtgctacataagacact 558
Query: 361 tgccaatgtttctggggaagaaagagtaattttcataactgcctttgatctgcatcccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgccaatgtttctggggaagaaagagtaattttcataactgcctttgatctgcatcccaa 618
Query: 421 ggtgatagttttagtcctcagacaggaattctggcaaaaagctaa 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ggtgatagttttagtcctcagacaggaattctggcaaaaagctaa 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 863
Length adjustment: 10
Effective length of query: 455
Effective length of database: 853
Effective search space: 388115
Effective search space used: 388115
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
