Query= MSMg01no388_f24.b1 MSMg01no388_f24.b1 CHROMAT_FILE:
MSMg01no388_f24.b1 PHD_FILE: MSMg01no388_f24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:42 2005
(451 letters)
>mm_chrX_156827529_156828379
Length = 851
Score = 864 bits (447), Expect = 0.0
Identities = 447/447 (100%)
Strand = Plus / Plus
Query: 5 gaattcaaatcaaaatccaattttggtcataaagaaaaaaaatgctctatttccctgcac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaatcaaaatccaattttggtcataaagaaaaaaaatgctctatttccctgcac 264
Query: 65 gttataagaaatcagaattgtgctttcatattgtaaagcactttgcaactataggcattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttataagaaatcagaattgtgctttcatattgtaaagcactttgcaactataggcattt 324
Query: 125 cttgactggaaagaaccaggaaggaaattcggacagcttatattttctcctggtctctac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttgactggaaagaaccaggaaggaaattcggacagcttatattttctcctggtctctac 384
Query: 185 ctgagagtcaatactgtggaaaccttattccagaattctgtctgttaaatgggcctttga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgagagtcaatactgtggaaaccttattccagaattctgtctgttaaatgggcctttga 444
Query: 245 aaagttgtttaagtgatctgagttttacagacctagcttatagtctatgaaagtggagat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaagttgtttaagtgatctgagttttacagacctagcttatagtctatgaaagtggagat 504
Query: 305 gctgaccatgggaataggaagccaaagcaaggtcttatagtgccacaccgcccccagtgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gctgaccatgggaataggaagccaaagcaaggtcttatagtgccacaccgcccccagtgt 564
Query: 365 tcccccacccccacccccaagcaggcagaggaacgatgaggacccctagttttttactac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcccccacccccacccccaagcaggcagaggaacgatgaggacccctagttttttactac 624
Query: 425 ctagtgaattatatagtttctttcaga 451
|||||||||||||||||||||||||||
Sbjct: 625 ctagtgaattatatagtttctttcaga 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_f24.g1 MSMg01no388_f24.g1 CHROMAT_FILE:
MSMg01no388_f24.g1 PHD_FILE: MSMg01no388_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:42 2005
(483 letters)
>mm_chrX_157033956_157034838
Length = 883
Score = 874 bits (452), Expect = 0.0
Identities = 479/497 (96%), Gaps = 14/497 (2%)
Strand = Plus / Minus
Query: 1 attctgggaacatgatgttcttctaccctgcaaagtacagagctatacacagcatatggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 attctgggaacatgatgttcttctaccctgcaaagtacagagctatacacagcatatggc 778
Query: 61 agggacttaaaagctgaagtgaccttgaaagagagtggcagagagagagagagagagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 agggacttaaaagctgaagtgaccttgaaagagagtggcagagagagagagagagagaga 718
Query: 121 gagagagagagagag--------------tgagactgttgtcccctttgacaaaaaggaa 166
||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 717 gagagagagagagagagagagagagagactgagactgttgtcccctttgacaaaaaggaa 658
Query: 167 gcaaagagacaaaggtggcttggcagacttgtgtacaagtcaatagaacagagatgtctc 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gcaaagagacaaaggtggcttggcagacttgtgtacaagtcaatagaacagagatgtctc 598
Query: 227 cactgtaatttatagaaagtgatgnctagcctcctgtcatcttgttcagaaataaatggc 286
||||||||||||||||||| || | | |||||||||||||||||||||||||||||||||
Sbjct: 597 cactgtaatttatagaaagggaggccaagcctcctgtcatcttgttcagaaataaatggc 538
Query: 287 atcaatcaactggcaaaggatttctcttggctcctgattggtgggctctccttttgttcc 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 atcaatcaactggcaaaggatttctcttggctcctgattggtgggctctccttttgttcc 478
Query: 347 agcagacacatttgcattctttctatctgggaagctgaggcctgacaaccactatttgtg 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 agcagacacatttgcattctttctatctgggaagctgaggcctgacaaccactatttgtg 418
Query: 407 agaagactggtggactaaactggcacatttttacctcgtttcagatggtctgctgttgct 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agaagactggtggactaaactggcacatttttacctcgtttcagatggtctgctgttgct 358
Query: 467 ctagggtatatctggtc 483
|||||||||||||||||
Sbjct: 357 ctagggtatatctggtc 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 16
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
