TGCGGCGCTAAACGACTACTATTTTCACAACACCGCGGAATTCTTCCCTT
TCCCTAAGAACCATGTTTGATTTTGTAACTTTTGTAACACATATGTAAAA
GTCTGTTCATCAATGTGGGACTTTTTGGGGGAAAAAAAGTAGATACTCAA
CGTGATCTATGTAATATATGTACAAAAAAGGGAAACAAAATCTCATGACA
CAAATACTTCGTGTTGTGTTGACCAAAGTGACTTTAGTCTGGTCTCTGCC
ATGCCTTCCTGTCCCCAGTTCGGTCTCCAATACTGAAAAGTCACATCAGT
TGTTGTTTATCATTAGCACACAAGTTTCTGACAAATAGGTCTTACAGTCT
ACAGCAAAGGCACTCTTTTCTTTGTTAATGAACTTCATTATCAAAGCCAC
ATGCCACTTCTCTCACTGCTGTGCAGTGTTTTGATGGTGTGCTATTTACT
TCCTACCGCTTAGTTTAAATCACTGAGGGAAAAAACAACTGCTTCTTGCT
GTGCCGAAAAACCTTTTGGCATATTCCCTATACATTGCGAGATCCTGGCA
CACTTTTGTGCCTCGTCACCCCCCCCCCCCCCCAACTCTTCCCCCCCGCC
CTCCCCCCCTCCCCTATTCACACCTCCATCCACCACCCTCCCCCTTTCTC
TTCCCCTTTTTTTCTCTCCACCCCCCTCCTGTCTTCTCTCCCTCCCCTCA
CTTTCTCCCCCTTTTCCCCCTTTCTTTCCTCGCTCTCCCACTCCCCCCCC
CCCCTCCCCTCCCTCCTCC

GATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTAACCTCCTGGCATTGATACTTAAC
AACTGTGGCACTGAAGAACTAAGAAATGATCTTGTATCCCCCTCTTTCTT
GTCTCTAGATGAACTCAAATTCTTCCATTTTTCATATTGGACTCTTTCTA
GTACATTTCCCACATTAACTTCAAATCTTTCTAAAATGGGTTAAATGTGA
TATTGTTTGAAGTGGTATATGAATTAGTCCCTCTGAGGGTCATCAAGTGT
TGAGCTAATACATTCTCTATTTATTTGATTTTAGTGAATATAAAGGATCA
GAACTTGATAATTTATAAAATATATTAGTAATATTTTATTATTTATATAT
AAATATATCATTTGCGACCATGCATATAAGAATATTACATATTAGATTAT
TTACCAATTCAGAGACAAGACTTACACAAAACCTGGTTTCAGATTCAATT
TCGACAACGCCACTCCATTCCCAGCATGACATCCATACATGTGCTTCTTC
CCTGTCCGCTCCCTCGTCTGCTCCCTTTTTGGGGCCTGCCCCCTTAAACC
TTTCTCCCCTCCCTTTTCCCCCCCCCCCTCTTTCCCCTTCGCCCCTTTTT
TTTTTTTTCCCCCCCCCCCTTCCTTATTTTCCCCCCTCCCCTCCCCTTTT
CTTTCCCCTTTTCCCTTCTTTCTTCCTTCCCTTCTTTTCCCTTCCTTTCT
TTTCTCGCCGCTCCCCCCCCCCCCTTTCCTT

Query= MSMg01no391_n17.b1 MSMg01no391_n17.b1 CHROMAT_FILE:
MSMg01no391_n17.b1 PHD_FILE: MSMg01no391_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:12 2005
         (392 letters)



>mm_chrX_81620118_81620909
          Length = 792

 Score =  719 bits (372), Expect = 0.0
 Identities = 387/392 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   accatgtttgattttgtaacttttgtaacacatatgtaaaagtctgttcatcaatgtggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accatgtttgattttgtaacttttgtaacacatatgtaaaagtctgttcatcaatgtggg 260

                                                                       
Query: 61  actttttgggggaaaaaaagtagatactcaacgtgatctatgtaatatatgtacaaaaaa 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctttttgggggaaaaaaagtagatactcaacgtgatctatgtaatatatgtacaaaaaa 320

                                                                       
Query: 121 gggaaacaaaatctcatgacacaaatacttcgtgttgtgttgaccaaagtgactttagtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaaacaaaatctcatgacacaaatacttcgtgttgtgttgaccaaagtgactttagtc 380

                                                                       
Query: 181 tggtctctgccatgccttcctgtccccagttcggtctccaatactgaaaagtcacatcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtctctgccatgccttcctgtccccagttcggtctccaatactgaaaagtcacatcag 440

                                                                       
Query: 241 ttgttgtttatcattagcacacaagtttctgacaaataggtcttacagtctacagcaaag 300
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgttgtttatcaacagcacacaagtttctgacaaataggtcttacagtctacagcaaag 500

                                                                       
Query: 301 gcactcttttctttgttaatgaacttcattatcaaagccacatgccacttctctcactgc 360
           |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 gcactcttttctttgttaataaacttcattatcaaagccacatgtcacttctctcactgc 560

                                           
Query: 361 tgtgcagtgttttgatggtgtgctatttactt 392
           ||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgcagtgttttgatggtgtgctatttactt 592


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space:   299889
Effective search space used:   299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no391_n17.g1 MSMg01no391_n17.g1 CHROMAT_FILE:
MSMg01no391_n17.g1 PHD_FILE: MSMg01no391_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:12 2005
         (339 letters)



>mm_chrX_81783666_81784404
          Length = 739

 Score =  625 bits (323), Expect = 0.0
 Identities = 335/339 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttaacctcctggcattgatacttaacaactgtggcactgaagaactaagaaatgatcttg 60
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 483 ttaacctcctggcattgatacttaaaaactgtggcactgaagaactaagaaatgatcttg 424

                                                                       
Query: 61  tatccccctctttcttgtctctagatgaactcaaattcttccatttttcatattggactc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tatccccctctttcttgtctctagatgaactcaaattcttccatttttcatattggactc 364

                                                                       
Query: 121 tttctagtacatttcccacattaacttcaaatctttctaaaatgggttaaatgtgatatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tttctagtacatttcccacattaacttcaaatctttctaaaatgggttaaatgtgatatt 304

                                                                       
Query: 181 gtttgaagtggtatatgaattagtccctctgagggtcatcaagtgttgagctaatacatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gtttgaagtggtatatgaattagtccctctgagggtcatcaagtgttgagctaatacatt 244

                                                                       
Query: 241 ctctatttatttgattttagtgaatataaaggatcagaacttgataatttataaaatata 300
           ||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ctcaatacatttgattttagtgaatataaaggatcagaacttgataatttataaaatata 184

                                                  
Query: 301 ttagtaatattttattatttatatataaatatatcattt 339
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttagtaatattttattatttatatataaatatatcattt 145


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space:   240900
Effective search space used:   240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)