TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGAA
TTCTATTTTATTCCAGGAAACAGGATACTTAAATGCTTATTAGAAATAGT
TCTGTCCCAAGGAGATTTTTTTATCCATGCAAAGTCCCTAAAATGAATTT
TTAGAATTAGAAATCATCTTTAATTAAACATGGTATGGATAAAGCCATCA
TGCAGCAATTCATTAATCTGATTTTTTCATAGCTTCAAGAATAGGAGAAG
GAATAAAAAAAATGGACACAATACAACATCTAAATTAACAAAATGTGATA
TCTGTGTATTGGCTTCTAGGTTGCTAATTTTTCCACAGCAGACTGATGCT
CATTACCCATTAGTTTGTCAGTAAGAAAGCTAAATATTTACATATCCTAT
TGTTTTAGATATATCCTCAAGTAAACAAACATTTTTATATTTAGAGTCTG
AGTGCTTTGAAACTCCATCAAATACCACCCAAAGTCTGCTAGCTGTAGAT
AAGCTTCCGGACTGTACAAACCCTCTGTGCTGTTGGTGCTCTTTACAGCT
CTCAAACCCAGACTCCACACTGGGCGCCTGGGCTGCCATCACTCACATAT
CCATCCTCTTCAACTGCATCCTTCCAGAGATTCCCTCTTCTGAGTGATGA
TGATACCCATTTCTCCTAGAAANCATATTATTAGGTCCCAAGGAAACTGA
AATTCTGAATAATCTGCAATAAGGGGTTGGATGGAAATTTTTCTCACGAA
GCCCACCCCGTTAAAATTTTTTGGGTTTTTTTC

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTAGAACCATAGAAACGTCTGGAAATA
TTGGAAGAACAAATAAGGATGTGAGGTCTGGATAAACATCTTATGCTGCT
GAGCATAAGATGTGGGGGGAAGCATGGGAGACCTGGCAAACATCAGAGTC
CTACTTGACCTGTTAGGACAGATGTACATGGGAATGCTGGGTAATATAAG
TATCTCAGTACACATAGAAGGTCTCAATAATGATTAGAGTCTTATAAAGC
ATAGAAGCCAAATGAAGTCTAATATAAACGTGAGGTCTGGTACACAAATG
AGGTCTAGTAACATAGGGAGGCCTAGAGAATATGGAAGGCCTTGTGACCA
AGCAGGTTATGGCTCCCTGGAATACCTGTTAAATTTGAGTGACCTGGGAT
GCATGGGCTTTCTGAGAAAAACTTGCGGCTTGCTAAGCCCTGGAACCTGG
AAAGCTTAGGAGGTGTGATAAGCATTAGAAGCCTGGTGAATAAGGACAGG
ATTACTAAGCCTGGGGATGCTAGAATCCAAAAATGATGGGGAAAGCCCTG
GAGGTCTATAAGGATTGGGAGGTGTGAAAATACATCTCAAGAAGGTTCCG
CCCGGGTTTTTTGTAAACGGACTGCCCCGTATGATAAGGTTCCTCCCCCC
GGTGTAACCCATTTAGCCGGGTATTTTTTTTAATTTAATAAAAACCTGCT
CCCTACCTATTCCCTTCCCCTTTCTGTGTCGCTGTGGGGG

Query= MSMg01no395_a20.b1 MSMg01no395_a20.b1 CHROMAT_FILE:
MSMg01no395_a20.b1 PHD_FILE: MSMg01no395_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:06:45 2005
         (562 letters)



>mm_chrX_4668816_4669776
          Length = 961

 Score =  928 bits (480), Expect = 0.0
 Identities = 537/556 (96%), Gaps = 5/556 (0%)
 Strand = Plus / Plus

                                                                       
Query: 10  gaattctattttattccaggaaacaggatacttaaatgcttattagaaatagttctgtcc 69
           |||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 210 gaattccattttagtccaggaaacaggatacttaaatgcttattagaaaaagttctgtcc 269

                                                                       
Query: 70  caaggagatttttttatccatgcaaagtccctaaaatgaatttttagaattagaaatcat 129
           |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 270 caaggagaattttttatccatgcaacgtccctaaaatgaatttttagaattagaaatcat 329

                                                                       
Query: 130 ctttaattaaacatggtatggataaagccatcatgcagcaattcattaatctgatttttt 189
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 330 ctttaattaaacatggtatggataaagccatcatgcagcaattcattaacctgatttttt 389

                                                                       
Query: 190 catagcttcaagaataggagaaggaataaaaaaaatggacacaatacaacatctaaatta 249
           ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 390 catagcttcaagaataggagaaggaat-aaaataatggacacaatacaacatctaaatta 448

                                                                       
Query: 250 acaaaatgtgatatctgtgtattggcttctaggttgctaatttttccacagcagactgat 309
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 acaaaatgtgatatctgtgcattggcttctaggttgctaatttttccacagcagactgat 508

                                                                       
Query: 310 gctcattacccattagtttgtcagtaagaaagctaaatatttacatatcctattgtttta 369
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 509 gctcattacccattagtttgtcagtaagaaagccaaatatttacatatcctattgtttta 568

                                                                       
Query: 370 gatatatcctcaagtaaacaaacatttttatatttagagtctgagtgctttgaaactcca 429
           |||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 569 gatatagcctcaagtaaacaaacatttttacatttagagtctgcgtgctttgaaactcca 628

                                                                       
Query: 430 tcaaataccacccaaagtctgctagctgtagataagcttccggactgtacaaaccctctg 489
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tcaaataccacccaaagtctgctagctgtagataagcttccggactgtacaaaccctctg 688

                                                                       
Query: 490 tgctgttggtgctctttacagctctcaaacccag-act-ccacactgggcgcctg-ggct 546
           |||||||||||||||||||||||||||||||||| | | || ||||||||| ||| ||||
Sbjct: 689 tgctgttggtgctctttacagctctcaaacccaggatttcc-cactgggcggctgtggct 747

                           
Query: 547 gccatcactcacatat 562
           ||||||||||||||||
Sbjct: 748 gccatcactcacatat 763


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 961
Length adjustment: 10
Effective length of query: 552
Effective length of database: 951
Effective search space:   524952
Effective search space used:   524952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)