XXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAATTCTTTGTT
TATCTCTGAGCCCCATTTTTAATGGGGTTACTTGATTTTCTGGAGTCCAC
CTTCTTGAGTTCTTTAAGATACAATTTGCAAAACACATGAAGCTCAAGAA
GAATGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACA
AAACACCCATGGAAGGTGTTACAGAGATAAAGTTTGGAGCTGAGACGAAA
GGATGGACCATCTAGAGACTGCCATACCTGGGGACCCATCCCATAATTAG
CCTCCAAACACTGATACCATTGCACACACTAGCAAGATTTTGCTGAAAGG
ACCCTGATATAGCTGTATCTTGTGAGGCTATGCCGGGGCCTGGCAAACAC
AGAAGTGGATGCTCACAGTCAGCTATTGGATGGATCACAGGGCCCCCAAT
GGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGGTCTGCAACCCTAT
AGGTGGAACAACAATATGAACTAACCAGTATCCCCCGGAGCTCGTGTCTC
TCCCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCAGTGGAAAGAG
AGGCCCAATGGTCTTGCAAACTTTATATGCCTCAGTACAGGGGAACGCCA
GGGCCAAGAAATGGGAGAGGGCTGGNATGGGGGTTGTGCCCCCCCACCCT
TTACTTACTATCCATTATTTTTCGCTTCCCTCTATTATAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCTGATTGCTTACATTCAGAACTCGTTTACCCTGAC
TCCAAATGTAAACTGCGCTCTGAATTCCTAACCTCTTGTGCATTCTTGAC
CCATGAAATCTGGTGGCCTCATCAACCCTTTCGTGATTTCAGAACCCTCT
CAAGCAATTACAAGAGGAATAATGCATTCCTTAACTCTTCTGGCTGCATT
TTCGGAGGCCAGATTCCTACCTGCTGAACTTGAACCTGCTGATGTCCCAT
GAGACTGGGAAGCAAGCAGGAACAATTAGTCTGTTAAAAACTGTACATAT
ATTTTCAAAGTCTAAAAAAACCAAAAACCAAAAAACAAAAACAAAAACAA
CAACAACAAAAAACCCAACACATTCTGCTCACACAAATATAAATAATTGA
GAACTTTAAAATATTTAACTTTAAATGGTCTGAAATCATCAGTGTTTTTT
CAGGTTGAATGAATATTTTGCATTAAAGATTGTCTATTCCTTGTTTACTT
GGCCAAATAGACTAAAAAGTAAAAAATAAACAAATAAAAATAAACAAATT
AGTGAAGTAGTTCCTTTCTGAGGGATGAAGAGTCCAGAGGAAAATTGAGG
CAAATGTGTAATTATGCCACTTCTCTCCTAATTACATCTATTTCATTTGC
TATTGACTTCTTTAACTCCACTGCCTCCCCCACTATATC

Query= MSMg01no396_a04.g1 MSMg01no396_a04.g1 CHROMAT_FILE:
MSMg01no396_a04.g1 PHD_FILE: MSMg01no396_a04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:02 2005
         (567 letters)



>mm_chrX_82117647_82118613
          Length = 967

 Score =  953 bits (493), Expect = 0.0
 Identities = 499/503 (99%), Gaps = 4/503 (0%)
 Strand = Plus / Minus

                                                                       
Query: 69  tcttgtgcattcttgacccatgaaatctggtggcctcatcaaccctttcgtgatttcaga 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 tcttgtgcattcttgacccatgaaatctggtggcctcatcaaccctttcgtgatttcaga 908

                                                                       
Query: 129 accctctcaagcaattacaagaggaataatgcattccttaactcttctggctgcattttc 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 accctctcaagcaattacaagaggaataatgcattccttaactcttctggctgcattttc 848

                                                                       
Query: 189 ggaggccagattcctacctgctgaacttgaacctgctgatgtcccatgagactgggaagc 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ggaggccagattcctacctgctgaacttgaacctgctgatgtcccatgagactgggaagc 788

                                                                       
Query: 249 aagcaggaacaattagtctgttaaaaactgtacatatattttcaaagtctaaaaaaacca 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 aagcaggaacaattagtctgttaaaaactgtacatatattttcaaagtctaaaaaaacca 728

                                                                       
Query: 309 aaaaccaaaaaacaaaaacaaaaacaacaacaac----aaaaaacccaacacattctgct 364
           ||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||
Sbjct: 727 aaaaccaaaaaacaaaaacaaaaacaacaacaacaaaaaaaaaacccaacacattctgct 668

                                                                       
Query: 365 cacacaaatataaataattgagaactttaaaatatttaactttaaatggtctgaaatcat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 cacacaaatataaataattgagaactttaaaatatttaactttaaatggtctgaaatcat 608

                                                                       
Query: 425 cagtgttttttcaggttgaatgaatattttgcattaaagattgtctattccttgtttact 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 cagtgttttttcaggttgaatgaatattttgcattaaagattgtctattccttgtttact 548

                                                                       
Query: 485 tggccaaatagactaaaaagtaaaaaataaacaaataaaaataaacaaattagtgaagta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tggccaaatagactaaaaagtaaaaaataaacaaataaaaataaacaaattagtgaagta 488

                                  
Query: 545 gttcctttctgagggatgaagag 567
           |||||||||||||||||||||||
Sbjct: 487 gttcctttctgagggatgaagag 465


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space:   533049
Effective search space used:   533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)