Query= MSMg01no401_a13.b1 MSMg01no401_a13.b1 CHROMAT_FILE:
MSMg01no401_a13.b1 PHD_FILE: MSMg01no401_a13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:33 2005
(581 letters)
>mm_chrX_54501987_54502966
Length = 980
Score = 1023 bits (529), Expect = 0.0
Identities = 556/567 (98%), Gaps = 5/567 (0%)
Strand = Plus / Minus
Query: 17 taaataaataaataaataaataaataaataaataaatatttttggccagtctttgttctc 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 taaataaataaataaataaataaataaataaataaatatttttggccagtctttgttctc 759
Query: 77 aaaactctgggagtgattttgttcatttttcttatcgagttgctatttttttggagagta 136
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 758 aaaactctgggagtgattttgttcatttttcttattgagttgctatttttttggagagta 699
Query: 137 agcatacttcatataatgaagttgctttgtaattatagctctatttacctatggtagtga 196
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 agcatacttcatatagtgaagttgctttgtaattatagctctatttacctatggtagtga 639
Query: 197 agggctgattgcttttctggctctagttggtaggaatctgttccttgtttctccagactc 256
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 638 agggctgattgcttttctggctctagttggtaggaatctgttccttgtctctccagactc 579
Query: 257 ttcatggggagggagaa--acccccccccctttaccactttattttgatgctttgacaaa 314
||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 578 ttcatggggagggagaaata---ccccccctttaccactttattttgatgctttgacaaa 522
Query: 315 atgggaatgctcccctcttcctatgactttgaaaggctaatagctacatagtgtattggt 374
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 521 atgggaatgctcccctcttcctatgactttgaaaggctaacagctacatagtgtattggt 462
Query: 375 ttgtctggcaggagcatagatgatcataggaataagaacaaaagataaagtgagaaataa 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttgtctggcaggagcatagatgatcataggaataagaacaaaagataaagtgagaaataa 402
Query: 435 gggctcaaaagccatggcttgttttgaacttgttctgagaactttccccatctcgtcttg 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gggctcaaaagccatggcttgttttgaacttgttctgagaactttccccatctcgtcttg 342
Query: 495 ttcaaatccccattgcgtcatagtctgtttggtatccgcaggggcagtgccaagatctga 554
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 341 ttcaaatccccattgcatcatagtctgtttggtatccgcaggggcagtgtcaagatctga 282
Query: 555 gaaagagaaagcagctggaattgcaga 581
|||||||||||||||||||||||||||
Sbjct: 281 gaaagagaaagcagctggaattgcaga 255
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 980
Length adjustment: 10
Effective length of query: 571
Effective length of database: 970
Effective search space: 553870
Effective search space used: 553870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no401_a13.g1 MSMg01no401_a13.g1 CHROMAT_FILE:
MSMg01no401_a13.g1 PHD_FILE: MSMg01no401_a13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:33 2005
(245 letters)
>mm_chrX_54338981_54339625
Length = 645
Score = 435 bits (225), Expect = e-126
Identities = 240/245 (97%)
Strand = Plus / Plus
Query: 1 attcttggattctgtgaatgttccacaataagcctcatggtagtcttgacatgaacaggt 60
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 201 attcttggattctgtgaatgttccacaataagcctcatggtagtcttgggattaacaggt 260
Query: 61 tagaagggggaaaggatagaagcagaaatctctttaagaagatgtgctgatggtcctggg 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 tagaagggggaaaggatagaagcaggaatctctttaagaagatgtgctgatggtcctggg 320
Query: 121 aagaaatgatgccggtctagtgacgctgagaaagtatttgggaggcagaacctttagaat 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaaatgatgccagtctagtgacgctgagaaagtatttgggaggcagaacctttagaat 380
Query: 181 ttgtgaggccccagggagtttagaggtcaggtagggtggggggtgggggcatccacgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtgaggccccagggagtttagaggtcaggtagggtggggggtgggggcatccacgtgg 440
Query: 241 ggaca 245
|||||
Sbjct: 441 ggaca 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
