Query= MSMg01no402_e07.b1 MSMg01no402_e07.b1 CHROMAT_FILE:
MSMg01no402_e07.b1 PHD_FILE: MSMg01no402_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:06 2005
(237 letters)
>mm_chrX_55404039_55404675
Length = 637
Score = 451 bits (233), Expect = e-131
Identities = 236/237 (99%)
Strand = Plus / Plus
Query: 1 cttcagggggtccaagaaactcctaaaacatatgcaaaattcggtgaatatgtgcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcagggggtccaagaaactcctaaaacatatgcaaaattcggtgaatatgtgcatttt 260
Query: 61 ctagagaatgggtctttagatctcattagattttcaaaagattaggaacctctcccaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctagagaatgggtctttagatctcattagattttcaaaagattaggaacctctcccaaga 320
Query: 121 ccaggctttaggccagcctgggctacacagtgtgaccctatgtagaagaaaaagcaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaggctttaggccagcctgggctacacagtgtgaccctatgtagaagaaaaagcaaaat 380
Query: 181 aaaatgaaacaacaaaaacaacaaaaccccaaacaaaacctaaccgagaaacacaga 237
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 aaaatgaaacaacaaaaacaacaaaaccccaaacaaaacctaaccgagaagcacaga 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no402_e07.g1 MSMg01no402_e07.g1 CHROMAT_FILE:
MSMg01no402_e07.g1 PHD_FILE: MSMg01no402_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:06 2005
(239 letters)
>mm_chrX_55606234_55606876
Length = 643
Score = 435 bits (225), Expect = e-126
Identities = 237/243 (97%), Gaps = 4/243 (1%)
Strand = Plus / Minus
Query: 1 tgtggactttctacaaagtaacctaagcagagacagaatgtagaggtagcctgaaggaag 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 443 tgtggactttctacaaagtaacctaagcagaggcagaatgtagaggtagcctgaaggaag 384
Query: 61 aagcgtagcagatgggcactcagcactggaag----agttccctctcaaggcagcagtcc 116
|||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 383 aagcgtagcagatgggcactcagcactggaagagttagttccctcttaaggcagcagtcc 324
Query: 117 ctgctatcatgttggtcctctagtccaaagtggatttatcctcaaagcgtgcaaaccatt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctgctatcatgttggtcctctagtccaaagtggatttatcctcaaagcgtgcaaaccatt 264
Query: 177 taagcaagagagcaggaggcagagagggaaacagttcaaaagcaggctgctttactgtct 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 taagcaagagagcaggaggcagagagggaaacagttcaaaagcaggctgctttactgtct 204
Query: 237 agg 239
|||
Sbjct: 203 agg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 643
Length adjustment: 9
Effective length of query: 230
Effective length of database: 634
Effective search space: 145820
Effective search space used: 145820
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
