MoG+ -Mouse Genome database with high added value-

BAC clone ordering.

BAC Information

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BAC

Clone Name	MSMg01-402M19
Chromosome	X (Build37)
Map Location	59,840,450 - 59,840,878
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ldoc1, LOC654353, EG627299, LOC666654, LOC385367, LOC671741, 4933402E13Rik, 4931400O07Rik, 1700019B21Rik
Downstream gene	LOC671878, LOC666695, EG627420
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ldoc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434784 MGI:2685212
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC654353 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654353
definition	note : eukaryotic translation initiation factor 4E pseudogene pseudo : _no_value

name	EG627299 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627299 MGI:3648616
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 70 ESTs, 1 Protein

name	LOC666654 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666654
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC385367 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:385367
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC671741 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671741
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	4933402E13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74437 MGI:1921687
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs, 18 Proteins

name	4931400O07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70936 MGI:1918186
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	1700019B21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75545 MGI:1922795
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC671878 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671878
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 105 ESTs, 6 Proteins

name	LOC666695 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG627420 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627420 MGI:3645755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Ldoc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66348057 GeneID:434784 MGI:2685212
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine zipper, down-regulated in cancer 1 transcript_id : NM_001018087.1

name	EG627299 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271655 GeneID:627299 MGI:3648616
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 70 ESTs, 1 Protein product : predicted gene, EG627299 transcript_id : XM_891956.3

name	4933402E13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271659 GeneID:74437 MGI:1921687
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs, 18 Proteins product : RIKEN cDNA 4933402E13 gene, transcript variant 2 transcript_id : XM_889482.3

name	4931400O07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407492 GeneID:70936 MGI:1918186
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 4931400O07 gene transcript_id : XM_985358.1

name	1700019B21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271660 GeneID:75545 MGI:1922795
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1700019B21 gene transcript_id : XM_001473416.1

name	LOC671878 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271662 GeneID:671878
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 105 ESTs, 6 Proteins product : similar to spermine synthase transcript_id : XM_001473434.1

name	EG627420 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271657 GeneID:627420 MGI:3645755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG627420 transcript_id : XM_892078.2

name	Ldoc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66348058 CCDS:CCDS30163.1 GeneID:434784 MGI:2685212
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : breast cancer, up-regulated 1 product : leucine zipper, down-regulated in cancer 1 protein_id : NP_001018097.1

name	EG627299 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271656 GeneID:627299 MGI:3648616
definition	codon_start : 1 product : similar to nuclear receptor co-repressor protein_id : XP_897049.3

name	4933402E13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83001257 GeneID:74437 MGI:1921687
definition	codon_start : 1 product : hypothetical protein LOC74437 isoform 2 protein_id : XP_894575.1

name	4931400O07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407493 GeneID:70936 MGI:1918186
definition	codon_start : 1 product : hypothetical protein LOC70936 protein_id : XP_990452.1

name	1700019B21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271661 GeneID:75545 MGI:1922795
definition	codon_start : 1 product : hypothetical protein LOC75545 protein_id : XP_001473466.1

name	LOC671878 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271663 GeneID:671878
definition	codon_start : 1 product : similar to spermine synthase protein_id : XP_001473484.1

name	EG627420 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271658 GeneID:627420 MGI:3645755
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897171.2

name	LOC666654 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666654
definition	number : 1 pseudo : _no_value

name	LOC385367 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385367
definition	number : 1 pseudo : _no_value

name	LOC671741 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671741
definition	number : 1 pseudo : _no_value

name	LOC671741 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671741
definition	number : 2 pseudo : _no_value

name	LOC666695 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666695
definition	number : 2 pseudo : _no_value

name	LOC666695 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666695
definition	number : 1 pseudo : _no_value

clone name	MSMg01-464B19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-505I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367O12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-060O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072O03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-326E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487N13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-343I02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-235O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538I09
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-196E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102I07
singlet/doublet	doublet
plural/unique	unique