NNTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTCAGAGGATCC
GCGGAATTCAGATGGTTTACTAACCTCATCTAAATGATTTATATAGGCTG
GCTAGGGTTTGCTCTAGGGACCTAAAAATTACCACATACCTGCCTCTGGG
TGATAGGCTAAATCCTACCATATAGAAATAGATATATAGCACAACTATGT
GGGCCCAGATTTCATCCCAGGGTCTCTGAAATTGAAGAGGATCACATCTC
TCACAGGCCCATGGTAGACTTGTTGAAGGTTTATGCCCCATTCTGGCTTA
GAGTGATGGTATTTACATCTCTATATTGGACAACTTCCTCAGAAGGGGGT
GTTAGTGCTTTTGCCCTGCTGTTTAGTTTGGGTAAACAGAGAGGGAAGAA
AGAATCCATATCACATATTCTTGGGATGGAAGGCAAGTGAGAGAATTTAA
ATTTTAGCAGGATCATTAACTGATAAGATTACTTATCAACCAAGAGATCC
AGAGCCAATTTTTTTTCTTTCTTTTTTTTTTCTATGACAGATGGATCCAT
GTCCCATCTCCTTGAAGCTTAATCACTTCTTTGTGTGGTAAGGATAACAA
GAAGAGGACAGATTTTCTTGGATTGAGAGCCTGTGGGTGAGAAGCATTTT
GCTAAACCCAATCTTCTGGAAAACTGGGTTGTATGATAAGAACAGTGGGG
GATGACTAAGAGAGAAATTGATTCGAGAGTGTCCTTCTAAAGTGAGAAA

NGGCGAAGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAATTTAGACTCCAACAAGC
CAACTAACCCAATTGGAAAATTGTTTATAGAGCTAAACAGAGAATTCTCA
ACAGAAGAATTTTAAATGGTCAGAAGGCACTTAAAGAAATGTTCATCATC
CTTAGTCATCAGGGAAATGCAAACCAAAACAACACTGAGATTTCAGTTTA
CAAAAAGTAGATTAGCCGAGATCAAAAGGTAATGGGAGAATACCTGCTTG
CCAGTTGTTCCATTGCTTAGAAACTTGTACACCCACTCAAAAAAAATCAA
TTTGTCAGTTCCTCAGAAAATTGGAAATAGTTCTACTTGAAGACACAGTT
ATACTACTCTTGAACTTCTTGAATGAAGCTTCACCATACCAACAGGGTCA
CATATTCTACTATGTTCATAGCAGCATTATTCATTATATCCAGAAACCTC
AAAAAACCCTGATGTCCCTCACCTGAAGAAAGGATACAGAGAATATGGGT
AATTTAGACAATGGAATACTAGTCAGCTCTTAAAATTTGGACATCATAAC
ATTTGCCCCAAAATGTTCCATAAATTTGGGCATGTACTGTATATTTTTAT
TGAATTCTGGAAAGTCTTCAATTTCTTTCTTCTTTGACCCAGTGGCCATT
AAGTTGAGAGATATTCAGGTTCCAAGAGTTTGTAGACCTCTCTCA

Query= MSMg01no406_a21.b1 MSMg01no406_a21.b1 CHROMAT_FILE:
MSMg01no406_a21.b1 PHD_FILE: MSMg01no406_a21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:14 2005
         (511 letters)



>mm_chrX_124303177_124304092
          Length = 916

 Score =  967 bits (500), Expect = 0.0
 Identities = 510/516 (98%), Gaps = 5/516 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctcatctaaatgatttatataggctggctagggtttgctctagggacctaaaaattacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctcatctaaatgatttatataggctggctagggtttgctctagggacctaaaaattacc 260

                                                                       
Query: 61  acatacctgcctctgggtgataggctaaatcctaccatatagaaatagatatatagcaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatacctgcctctgggtgataggctaaatcctaccatatagaaatagatatatagcaca 320

                                                                       
Query: 121 actatgtgggcccagatttcatcccagggtctctgaaattgaagaggatcacatctctca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actatgtgggcccagatttcatcccagggtctctgaaattgaagaggatcacatctctca 380

                                                                       
Query: 181 caggcccatggtagacttgttgaaggtttatgccccattctggcttagagtgatggtatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggcccatggtagacttgttgaaggtttatgccccattctggcttagagtgatggtatt 440

                                                                       
Query: 241 tacatctctatattggacaacttcctcagaagggggtgttagtgcttttgccctgctgtt 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacatctctacattggacaacttcctcagaagggggtgttagtgcttttgccctgctgtt 500

                                                                       
Query: 301 tagtttgggtaaacagagagggaagaaagaatccatatcacatattcttgggatggaagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagtttgggtaaacagagagggaagaaagaatccatatcacatattcttgggatggaagg 560

                                                                       
Query: 361 caagtgagagaatttaaattttagcaggatcattaactgataagattacttatcaaccaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caagtgagagaatttaaattttagcaggatcattaactgataagattacttatcaaccaa 620

                                                                       
Query: 421 gagatccagagccaattttttttctttctttttttttt-----ctatgacagatggatcc 475
           ||||||||||||||||||||||||||||||||||||||     |||||||||||||||||
Sbjct: 621 gagatccagagccaattttttttctttctttttttttttttttctatgacagatggatcc 680

                                               
Query: 476 atgtcccatctccttgaagcttaatcacttctttgt 511
           ||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgtcccatctccttgaagcttaatcacttctttgt 716


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 916
Length adjustment: 10
Effective length of query: 501
Effective length of database: 906
Effective search space:   453906
Effective search space used:   453906
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)