AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAGACCATGACCCTAAATACTTGCTTTTTATTCTTAGCAGACAGCAGT
GCAGAGGATGTCTTACTTGTAATTTCATTTACACATACATCCAAATTTCA
TGATACTGTACAGTGATTTGCACTTAGAAATCATATTGCTAAGTTTAAAA
GGTAATCATTCTCTAGGCCTGCCACACAGTATGGACCTCTCTCAAGATAC
ATGACAGGAACAGTTACCCATTGCTATAGGTCAGGCACAAAATTTCAAGA
ATACATAAGCAACTTTTAACTGTGGTGTGCTATGGCGCTGCAATGGGATG
TTTGCTGGGTCACGTGCATTATGTAGTGCCTTTTGGACATGGGGAAAATT
TCAAGCTACCACAAGTTCATCAGAATATAACCCATTCATCAGGCATGGAA
CACTTTTACCCTAATCTCTAAGAAATACCTACTCACAGTCTATACGTCCT
ATGAACAAAATGTGGATTCTAGGAAGTACACAATTTAACAATGACTTAAA
TCTAGAGTTTGAGTGTTAAAAGTTCTGAACTGGATCCGAGCTGATTTTAT
CCCTCCAGCTACTAGATGCTTTTACCTTCCTGGTGTGAAATCTTTACAGC
CCAGTTTTCCTATCTTTGANAGGAAGCAAGGATGATACAAACACACCACT
CCGTGTCCTAGAATCCCTTAACAGGGTGCTATTGGCTCCGTCAGTGG

ATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCCCTCGTGGCATGAGACTCAAGTTGG
GCCAGTCATTGGTTGGGAGCAGAAAGTGAGAGAATTGCTATAACTCTTTT
TTATTAGATATTTTCTTTATATACATTTTAAAATTCAAATGCTATCCCGA
AAGTTCACTATACCTTCCCCCCGCCCCCCACTCTGCTCCCCTACCCACCC
ATTCCCGCTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTT
TGCAATACCAAGGGGCCTCTCTTCCCAATGATGGCCGACTAGGCCATCTT
CTACTACATATGCAGCTAGAGACACAAGCTCTGGGGGTACTGGTTAGTTC
ATATTGTTGTTCCACCTATTGGGTTGCAGACCCCTTCAGCTCCTTGGGTG
CTTTCTCTAGCTTCTCCATTGGGGACCCTGTGTTTCATCTTATAGATGAC
TGTGAACATCATTTTCAGCATTTGCCAGGCACTGGGATAGCCTCATATGA
GACAGCTATACCACGGTCCCTTATAGACCGGAAAACTCGTGTGTCTCACG
CTTTGTGTCTACTTTGGCATTCCTATTTCTCCCCTGTCACCCGTGCCCGA
TTATCAAACGTGATTGCCTCCCTCCCCCTACCCCTTTTTTGCTCCACCTC
TCATTTCCTTCCTTTTCTTCTATCTCTTCTGGCCCTACTCGCTCCCCCTT
T

Query= MSMg01no407_g01.b1 MSMg01no407_g01.b1 CHROMAT_FILE:
MSMg01no407_g01.b1 PHD_FILE: MSMg01no407_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:00 2005
         (658 letters)



>mm_chrX_141843768_141844825
          Length = 1058

 Score = 1237 bits (640), Expect = 0.0
 Identities = 651/655 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcagaccatgaccctaaatacttgctttttattcttagcagacagcagtgcagag 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 ggaattcagaccatgaccctaaatacttgctttttattcttagcagacagcagtgcagag 799

                                                                       
Query: 64  gatgtcttacttgtaatttcatttacacatacatccaaatttcatgatactgtacagtga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 798 gatgtcttacttgtaatttcatttacacatacatccaaatttcatgatactatacagtga 739

                                                                       
Query: 124 tttgcacttagaaatcatattgctaagtttaaaaggtaatcattctctaggcctgccaca 183
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tttgcacttagaagtcatattgctaagtttaaaaggtaatcattctctaggcctgccaca 679

                                                                       
Query: 184 cagtatggacctctctcaagatacatgacaggaacagttacccattgctataggtcaggc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 cagtatggacctctctcaagatacatgacaggaacagttacccattgctataggtcaggc 619

                                                                       
Query: 244 acaaaatttcaagaatacataagcaacttttaactgtggtgtgctatggcgctgcaatgg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 acaaaatttcaagaatacataagcaacttttaactgtggtgtgctatggcgctgcaatgg 559

                                                                       
Query: 304 gatgtttgctgggtcacgtgcattatgtagtgccttttggacatggggaaaatttcaagc 363
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aatgtttgctgggtcacgtgcattatgtagtgccttttggacatggggaaaatttcaagc 499

                                                                       
Query: 364 taccacaagttcatcagaatataacccattcatcaggcatggaacacttttaccctaatc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 taccacaagttcatcagaatataacccattcatcaggcatggaacacttttaccctaatc 439

                                                                       
Query: 424 tctaagaaatacctactcacagtctatacgtcctatgaacaaaatgtggattctaggaag 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tctaagaaatacctactcacagtctatacgtcctatgaacaaaatgtggattctaggaag 379

                                                                       
Query: 484 tacacaatttaacaatgacttaaatctagagtttgagtgttaaaagttctgaactggatc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tacacaatttaacaatgacttaaatctagagtttgagtgttaaaagttctgaactggatc 319

                                                                       
Query: 544 cgagctgattttatccctccagctactagatgcttttaccttcctggtgtgaaatcttta 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cgagctgattttatccctccagctactagatgcttttaccttcctggtgtgaaatcttta 259

                                                                  
Query: 604 cagcccagttttcctatctttganaggaagcaaggatgatacaaacacaccactc 658
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 258 cagcccagttttcctatctttgaaaggaagcaaggatgatacaaacacaccactc 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)