Query= MSMg01no408_h10.b1 MSMg01no408_h10.b1 CHROMAT_FILE:
MSMg01no408_h10.b1 PHD_FILE: MSMg01no408_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:27 2005
(427 letters)
>mm_chrX_107500746_107501572
Length = 827
Score = 803 bits (415), Expect = 0.0
Identities = 424/427 (99%)
Strand = Plus / Minus
Query: 1 ttgaaaagcaattggaagtaagaagcgtgggttatgaggaggacataaggctctgtagaa 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ttgaaaagcaactggaagtaagaagcgtgggttatgaggaggacataaggctctgtagaa 568
Query: 61 gctaggcaaatgtgagcaaaggttccccaagcaatgtggtttttataattttgtcacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gctaggcaaatgtgagcaaaggttccccaagcaatgtggtttttataattttgtcacaca 508
Query: 121 gcactgacctattggagctgtctcctatgcatcttataattttccaaagtaaaatcaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 507 gcactgacctattggagctgtctcctatgcatcttataattttccaaagtaaaataaata 448
Query: 181 gggttctagaaagaggatctcctctgctgtacctggcttttgcctgctactctgttgata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gggttctagaaagaggatctcctctgctgtacctggcttttgcctgctactctgttgata 388
Query: 241 aaccagttgaatcctctggactgagtttagggaagtctgtgtgtcacttgtccttaattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aaccagttgaatcctctggactgagtttagggaagtctgtgtgtcacttgtccttaattc 328
Query: 301 tcagcattaccaaaggattttctggctcccagtagagactagattgcttttctcagcaca 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 327 tcagcattaccaaaggattttctggctcccagtagagactagattgtttttctcagcaca 268
Query: 361 ctccactgcattaccatatgcacaaatgtatgcacagtcatgtgtgtgtttaggcacatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctccactgcattaccatatgcacaaatgtatgcacagtcatgtgtgtgtttaggcacatg 208
Query: 421 ctcagga 427
|||||||
Sbjct: 207 ctcagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_h10.g1 MSMg01no408_h10.g1 CHROMAT_FILE:
MSMg01no408_h10.g1 PHD_FILE: MSMg01no408_h10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:27 2005
(324 letters)
>mm_chrX_107340705_107341428
Length = 724
Score = 545 bits (282), Expect = e-159
Identities = 313/325 (96%), Gaps = 3/325 (0%)
Strand = Plus / Plus
Query: 1 cttaaggcagtgagtggcaggggagaaaaattaagaggaaaagatctgtgtgattcgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaaggcagtgagtggcaggggagaaaaattaagaggaaaagatctgtgtgattcgcaa 260
Query: 61 aagattggtaagaccaggctttaacaggtggtctgctgtagagcaagggctgacactaag 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagatgggtaagaccaggctttaacaggtggtctgctgtagagcaagggctgacactaag 320
Query: 121 ggattggatttggaggagtgaggtgtatcatgtctgatacttanggtcctgagattataa 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 321 ggattggatttggaggagtgaggtgtatcatgtctgatacttaaggtcctgagattagaa 380
Query: 181 ttatccactcatccacacatgcatgtacacccattcaaaaacatattaaaaattaatatc 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 ttatccactcatccacacatgcatgtacacccattcaaaaacattttaaaaattaatatc 440
Query: 241 agtcttctttatcaggcctcaaaaaaaaaaa---cctttccttcactttctgctccaatt 297
|||| | ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 agtcaacaaaatcaggcctcaaaaaaaaaaaaaacctttccttcactttctgctccaatt 500
Query: 298 tttgtctctgtatctcctcccatgg 322
|||||||||||||||||||||||||
Sbjct: 501 tttgtctctgtatctcctcccatgg 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
