NNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTTGTTTCGCTCTGAGCCCCATTTTTTTAATGGGATTAC
TTGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATT
AGTCCTCTATCTGATTTAGGATAGGTAAAGATCCTTTTCCAATCTGTTGG
TGGCCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGAA
ATTTTATGAGGTCCCATTTGTAGATTCTCGATCTTACAGCACAAGCCATT
GCTGTTCTATTCAGGAATTTTTCCCCTGTACCATTATCTTCAAGGCTTTT
CCCTACTTTCTCCTCTACAAGTTTCATTGTCTCTGGTTTTATGTGGGTGC
CTTAATCCACTTAGATTTGACCTTAGTACAAGGAGATAGGAATGGATCAA
TTCACATTCTTCTACATGATAACCGCCAGATGTGCCAGCACCATTGCTTG
AAAATACTGTCTTTTTTCCACTGTGTGGTTTTTGATCCCTTGTCAAAGAT
CAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGACTTCAATTCTATTCT
ATTGGTCTACTTGTCTGTCACTATACCAGTACCTTGCAGTTTTTATCACA
ATTGCTCTGTAGTACAGCTTTACGTCAGGCATGGTGCTTCCACCAGAGGT
ACTTTTATCCTTGAACAGGGTTTTTTCCATCCTAGGTTT

CGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGAGCAGCCCCTGATAGGGTGCCTTTT
GAAGATGTGCTTCTAGTGGAAGAAAAAAATTGGAAAAAAAAGTAAATTTT
GATTTTAATATTTAAATCAATTACATTTTAAACTTTCAGACATTAAAGCT
TAGAAGCGACTAAATGGAGATTTTCTAGTTCAGTACTCTTGTAATGCAGA
TCAGCACACTCAAGTACAGACAGCTTAAATGCATTGCCTGTGGCCATCTA
TCAGAGGTGGTGCAGGGTTTTGTTTGTTTTGTTTTTCATATTTTGTTCTG
AAGATTTTATTTGTAGCTTGGATAGTAGCAGTTATACAGCCTCAACAGAA
ATGTTAATGAATTGCAAGACATATTAGATAAACACAAATTTTGCTCAATT
TCAAGAAGCACCCTTATTTCTGTTTGTTCATCTGAGATCCTGAATTTAAT
CCTTTTATCAGTTTTTAACCGTATCAAAAGTAGAAAATTTGTTGATTTTA
TATTCTCCCTCTACCCCTCTCTCTGATAATTTCAGTGAACAAAGGTTTAA
CCACAAAAGTCTTCAAACACACTCTCATGTTTCCTTCAGCTATTTACTAG
CAGAATGCTTTTCAAATAAAATTGCAAGTTACCTTTCTCAATGGCCAGAA
GTCATCTAAAGATTTTCAAGTTATAGTAGGCG

Query= MSMg01no411_d15.g1 MSMg01no411_d15.g1 CHROMAT_FILE:
MSMg01no411_d15.g1 PHD_FILE: MSMg01no411_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:12 2005
         (557 letters)



>mm_chrX_106212657_106213612
          Length = 956

 Score = 1054 bits (545), Expect = 0.0
 Identities = 554/557 (99%), Gaps = 1/557 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgagcagcccctgatagggtgccttttgaagatgtgcttctagtggaagaaaaaaattgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagcagcccctgatagggtgccttttgaagatgtgcttctagtggaagaaaaaaattgg 260

                                                                       
Query: 61  aaaaaaaagtaaattttgattttaatatttaaatcaattacattttaaactttcagacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaaaagtaaattttgattttaatatttaaatcaattacattttaaactttcagacat 320

                                                                       
Query: 121 taaagcttagaagcgactaaatggagattttctagttcagtactcttgtaatgcagatca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaagcttagaagcgactaaatggagattttctagttcagtactcttgtaatgcagatca 380

                                                                       
Query: 181 gcacactcaagtacagacagcttaaatgcattgcctgtggccatctatcagaggtggtgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcacactcaagtacagacagcttaaatgcattgcctgtggccatctatcagaggtggtgc 440

                                                                       
Query: 241 agggttttgtttgttttgtttttcatattttgttctgaagattttatttgtagcttggat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agggttttgtttgttttgtttttcatattttgttctgaagattttatttgtagcttggat 500

                                                                       
Query: 301 agtagcagttatacagcctcaacagaaatgttaatgaattgcaagacatattagataaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtagcagttatacagcctcaacagaaatgttaatgaattgcaagacatattagataaac 560

                                                                       
Query: 361 acaaattttgctcaatttcaagaagcacccttatttctgtttgttcatctgagatcctga 420
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 acaaattttgctcaatttcaagaagcacccttatttctgtttgttcacctgagatcctga 620

                                                                       
Query: 421 atttaatccttttatcagtttttaaccgtatcaaaagtagaaaatttgttgattttatat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 atttaatccttttatcagtttttaaccgtatcaaaagtagaaaatttgttgatttcatat 680

                                                                       
Query: 481 tctccctctacccctctctctgataatttcagtgaacaaaggtttaaccacaaaagtctt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctccctctacccctctctctgataatttcagtgaacaaaggtttaaccacaaaagtctt 740

                            
Query: 541 caaacacactctcatgt 557
           |||||||||||| ||||
Sbjct: 741 caaacacactct-atgt 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 956
Length adjustment: 10
Effective length of query: 547
Effective length of database: 946
Effective search space:   517462
Effective search space used:   517462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)