Query= MSMg01no411_n23.b1 MSMg01no411_n23.b1 CHROMAT_FILE:
MSMg01no411_n23.b1 PHD_FILE: MSMg01no411_n23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:04 2005
(584 letters)
>mm_chrX_130594810_130595792
Length = 983
Score = 1052 bits (544), Expect = 0.0
Identities = 571/580 (98%), Gaps = 1/580 (0%)
Strand = Plus / Minus
Query: 5 gaattcacgcccattctcgttccgcatggcactaagtgctgtctcttggtcttggtactc 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gaattcacgcccattcaagttccgcatggcactaagtgctgtctcttggtcttggtactc 724
Query: 65 gcagaagccatagccctttggttttcctgtctccctatcgtataccaatctgcagaccaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gcagaagccatagccctttggttttcctgtctccctatcgtataccaatctgcagaccaa 664
Query: 125 aaccaagtattaggaactcacacaggcttcctgctaacactgccatagtcttatttagcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 aaccaagtattaggaactcacacaggcttcctgctaacactgccatagtcttatttagcc 604
Query: 185 cactctgactgctttcttggctcggaaacatttttaatgaaagaaatctttcaggcaaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 cactctgactgctttcttggctcggaaacatttttaatgaaagaaatctttcaggcaaga 544
Query: 245 ctggatatgaagtatcgagcatgtgcatgtacccctcttaatttgtgcttttgaagactc 304
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 543 ctggatatgaagtatcgagcatgtgcatgtacccc-caaaatttgtgcttttgaagactc 485
Query: 305 tcacaatgaagactcctgaaagaggatctcacctgaaactaacaacaggcccaacctcag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tcacaatgaagactcctgaaagaggatctcacctgaaactaacaacaggcccaacctcag 425
Query: 365 agaagatgtccttcagttgttcttcagtagcttcataagggatgtttcccactaaagaag 424
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agaaaatgtccttcagttgttcttcagtagcttcataagggatgtttcccactaaagaag 365
Query: 425 agacaacatattaaaattctggggcagtaactgagctcttgagcgagcaagtgaacagta 484
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agacaacgtattaaaattttggggcagtaactgagctcttgagcgagcaagtgaacagta 305
Query: 485 ggctttctatctgcatcaacacataggcaataactgactgaacagcgttctccaaaaccc 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 304 ggctttctatctgcatcaacacataggcaataactgactgaacagcgttctccaaacccc 245
Query: 545 ccctcgaccactgtctcttttcagatcttataacaaggga 584
||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ccctcgaccactgtctcttttcagatcttataacaaggga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 983
Length adjustment: 10
Effective length of query: 574
Effective length of database: 973
Effective search space: 558502
Effective search space used: 558502
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_n23.g1 MSMg01no411_n23.g1 CHROMAT_FILE:
MSMg01no411_n23.g1 PHD_FILE: MSMg01no411_n23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:04 2005
(436 letters)
>mm_chrX_130395483_130396318
Length = 836
Score = 828 bits (428), Expect = 0.0
Identities = 435/438 (99%), Gaps = 2/438 (0%)
Strand = Plus / Plus
Query: 1 tctggatctactaataaactgggatgactaggcccctgttccaattagggatcccaggaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 tctggatctactaataaactgggatgactaggcccctgctccaattagggatcccaggaa 260
Query: 61 gccatgggagatgggtcatcacctgcctaaaatacatcaatcctaaccatccttgaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccatgggagatgggtcatcacctgcctaaaatacatcaatcctaaccatccttgaggtt 320
Query: 121 cttttgggttaatttagtttggttttgtcctgagaggctctgccagagcctgagcaatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttttgggttaatttagtttggttttgtcctgagaggctctgccagagcctgagcaatac 380
Query: 181 agatgcagatcctcgcagccaaccatcggactgagcacagggaccccaatgaaggagctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatgcagatcctcgcagccaaccatcggactgagcacagggaccccaatgaaggagctg 440
Query: 241 gagaaaggaaggactgaggagctgaaggggtttgaaaaggcataggaagaacaataacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagaaaggaaggactgaggagctgaaggggtttgaaaaggcataggaagaacaataacat 500
Query: 301 caaccaaccaggccccccc--agagctcccagggactaaacccccaaccaacgagtacac 358
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaccaaccaggcccccccccagagctcccagggactaaacccccaaccaacgagtacac 560
Query: 359 atggagggactcatggttccagtagcatatatagctactggatgtagtggatggccttgt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atggagggactcatggttccagtagcatatatagctactggatgtagtggatggccttgt 620
Query: 419 caaacatcaatgggaaga 436
||||||||||||||||||
Sbjct: 621 caaacatcaatgggaaga 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
