Query= MSMg01no411_o13.b1 MSMg01no411_o13.b1 CHROMAT_FILE:
MSMg01no411_o13.b1 PHD_FILE: MSMg01no411_o13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:07 2005
(662 letters)
>mm_chrX_62657689_62658750
Length = 1062
Score = 1228 bits (635), Expect = 0.0
Identities = 655/665 (98%), Gaps = 6/665 (0%)
Strand = Plus / Plus
Query: 1 ggactaggcaagctgtgaaaattgtgcttcctgg------aaaaaaaaaaaggagggctg 54
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 195 ggactaggcaagctgtgaaaattgtgcttcctggaaaaaaaaaaaaaaaaaggagggctg 254
Query: 55 tcacaggctttgaaatggctgttcatgactaagaagctcacaggatgcaaaagatttaac 114
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tcacagactttgaaatggctgttcatgactaagaagctcacaggatgcaaaagatttaac 314
Query: 115 agtgctctttgaaaattacgttatttgaggaacctacaacttgatttacttttaggcaca 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 agtgctctttgaaaattacgttatttgaggaacctacaacttgatttacttttaggcaca 374
Query: 175 ggttttacttatgatgaatcagcatggtagctattttccttaatacagaagcatttttgg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggttttacttatgatgaatcagcatggtagctattttccttaatacagaagcatttttgg 434
Query: 235 gaatttctccaaattgctataatataggtaatttctttttacaaacaaccttgaagttct 294
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gaatttctccaaattgctaggatataggtaatttctttttacaaacaaccttgaagttct 494
Query: 295 tttaaaaataaatgacctacaaattcactatcatgctagtgtctagagaggaagataatt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tttaaaaataaatgacctacaaattcactatcatgctagtgtctagagaggaagataatt 554
Query: 355 gcaagtacacaatattcataaaacagtaccattacatatgacatttacaggttacttctt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gcaagtacacaatattcataaaacagtaccattacatatgacatttacaggttacttctt 614
Query: 415 tttgaaggggcatgtgtctataaagtgataaccttaactggttttgaaattgtgatgttt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tttgaaggggcatgtgtctataaagtgataaccttaactggttttgaaattgtgatgttt 674
Query: 475 tgattcactctcaagaattatgaaactgcaggtatgcacgaccaagcgtgactacacctt 534
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 675 tgattcactctcaagaattatgaaactgcaggtatgcatgaccaagcgtgactacacctt 734
Query: 535 gctacttagtacacataactaaatatggtcataccaagtaggctttgaagctagctttgc 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gctacttagtacacataactaaatatggtcataccaagtaggctttgaagctagctttgc 794
Query: 595 cattgtctaccatacaagctctagtatttggagacctcaacatgtattcttcattagtat 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 cattgtctaccatacaagctctagtatttggagacctcaacatgtattcttcattagtat 854
Query: 655 ctttg 659
|||||
Sbjct: 855 ctttg 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_o13.g1 MSMg01no411_o13.g1 CHROMAT_FILE:
MSMg01no411_o13.g1 PHD_FILE: MSMg01no411_o13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:07 2005
(651 letters)
>mm_chrX_62734036_62735088
Length = 1053
Score = 1189 bits (615), Expect = 0.0
Identities = 643/657 (97%), Gaps = 10/657 (1%)
Strand = Plus / Minus
Query: 1 caggtagctagggaggcaggagatggacacacaggcagacagatgcaggagtttgcaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 caggtagctagggaggcaggagatggacacacaggcagacagatgcaggagtttgcaaaa 794
Query: 61 --gagaaaggacaaaactagaaacaggcagtgagaaccatgtgaagagacaaaatggtgt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 gggagaaaggacaaaactagaaacaggcagtgagaaccatgtgaagagacaaaatggtgt 734
Query: 119 aaaagtcaggataagttagacattagctgagagactgtcccagcaaatgaccaacatctt 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 733 aaaagtcaggataagttagacattagctgagagactgtcccagcaaatgaccaacagctt 674
Query: 179 tgaactataaagatgtctccatgtgttaattaaacctcaaagtgaatctacaaaatcccc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgaactataaagatgtctccatgtgttaattaaacctcaaagtgaatctacaaaatcccc 614
Query: 239 acaac----atttttatcatcttctatataaatgcataatttcacttatgtaccatttga 294
||||| | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 acaacaccaa----taccatcttctatataaatgcataatttcacttatgtaccatttga 558
Query: 295 tagtcatttcaaatttgctccccagaaattattatagaagtaagaatataaaatgcagaa 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tagtcatttcaaatttgctccccagaaattattatagaagtaagaatataaaatgcagaa 498
Query: 355 tatagagaaggtctgaagcatgctggctacagggtatgctacccattgtaatcatgattt 414
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tatagagaaggtctgaggcatgctggctacagggtatgctacccattgtaatcatgattt 438
Query: 415 catagctcctgtgactttttacagatgttcactagagtacgttggccagtggtcattcat 474
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 catagctcctgtgattttttacagatgttcactagagtacgttggccagtggtcattcat 378
Query: 475 agatgatagcaaggaaagagtatatttttctctttacctatagacttttgataaattctg 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agatgatagcaaggaaagagtatatttttctctttacctatagacttttgataaattctg 318
Query: 535 ggaaaaggcagtcatagtgtttactttaaaaactcatgctcagacaactctgattaaact 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ggaaaaggcagtcatagtgtttactttaaaaactcatgctcagacaactctgattaaact 258
Query: 595 cagtaagtcacaaaacaaaatgaaaagtcctgaacataggaaagtcatctgaaggga 651
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cagtaagtcacaaaacaaaatgaaaagtcctgaacataggaaagtcatctgaaggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1053
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1043
Effective search space: 668563
Effective search space used: 668563
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
