GGGATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXATTCGAGAGGATGCG
CGGAATTCAAAAACATTTCAGACATTCTTCTCTGGTAAGGTTCAGACCTA
CAGATTAAGAACCACAGATCTTCTAAACTACTGTATGGACCAAGGGAACT
TCTGATATGCCCATTCTGAACCAGGGATCCTCAGATCATCCCCAATAGCC
TAAGTGACCTTCATCTTACCTGTTTAGAACCAATGTGCTGGGGCTGGAGA
GATGGCTCAGCAGTTAAAAGCACTGACTTCTCTTCCACAGGTCCTGAGTT
CAATTCTCAGCAATCACTTGTTTTTTTTACCATCTGTCATGGGACCTGAT
GCCACCTTTTGGTGTGTCTGAAGACAATGACAGTATACCCACATACATGA
AATAGAACCTATGTGACTCACAAATTACACCAATAACTCAAGGGGGATTC
AGATGTAACCCCCGAAATCAAATATGTTAGAAACTCCCCAGTATTGAAGG
CAGCATTATCATATGAGAACCAGAAACCTCAGAATTTCGTTAATTTCCCT
CAGAATTACCACTTCAGAACAAAGGTGTCACAGAGGTCCTCAATAACTGA
AGATGCCCTGATACATATGACATGATAAGCAAAGGACTTATCAACAGACA
CCATCTACATTTTAAGAAAGCCACAAAGTTGACTCTTTTACTATCAGCAT
GCAATAGCATTGATGAAGTTACAATGCCGACC

NAACGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAGAAAGACCAGTGGTGTG
GGTAGCAGCAAAGTTCTTGAGTCTCAAAGACATCAGATACCATGGCTGAA
TATTCCAACTACAACAACTAGGTAACATTGGTTCTACACTTAGCATGCCG
TTTCTAGAAAAAAAATTAAAGAATTAAGCAATGTTTCCTCTGAACCTGAC
ATGTTACTATCACAAATGAAAGAAGGATCCATGATCACATGAATATGAAA
GGGGCATGAAGCAGCACAATTGTTCAAATTATTGGCAGCTAGTCAGCATT
AACACAAGAAGGGACCAAAGACAATAAACAGTTTTGAAGACATGTCCAAA
TGACCGCGTTCATTTACAAGTTTCTTACCCATTCCTTGTATATCCATTGA
TTGATTAACTCATTGATTAAAGCCCTCAGGTTCCAATCACTTTTCAGAGT
GAGTGCATATTGTACTACCTATGAACATTGTACTGTGGACCANAGCCTTC
ATCTAAGACCCATGACTGACATTTCANAACAATTTAACCACAGAATTCTT
TATTTGAAACATAGTGATAAGATCCATCTATCTCCTTCAGGATATCTCTG
CTTTGTTCCAAATGAGAAAAATGCAATCCAAGTTCAGGACCTTGATCCCT
TATCCTTGCTTCTTAACCCTTAGGGGTTGTCCAGAATGAAG

Query= MSMg01no412_c08.b1 MSMg01no412_c08.b1 CHROMAT_FILE:
MSMg01no412_c08.b1 PHD_FILE: MSMg01no412_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:25 2005
         (573 letters)



>mm_chrX_121307230_121308205
          Length = 976

 Score =  629 bits (325), Expect = 0.0
 Identities = 415/449 (92%), Gaps = 13/449 (2%)
 Strand = Plus / Minus

                                                                       
Query: 125 ctaagtgaccttcatcttacctgtttagaaccaatgtgctggggctggagagatggctca 184
           |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 976 ctaagtgaccttaatcttacctgtctaggaccaatgtgctggggctggagagatggctca 917

                                                                       
Query: 185 gcagttaaaagcactgact-tctcttccacaggtcctgagttcaattctcagcaatcact 243
           ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||
Sbjct: 916 gcagttaaaagcactgactgt-tcttccacaggtcctgagttcaattctcagcaaccact 858

                                                                       
Query: 244 tgtttttttt----accatctgtcatgggac-ctgatgccaccttttggtgtgtctgaag 298
           ||  || | |    ||||||||||||||||| | ||| ||||||| ||||||||||||||
Sbjct: 857 tg--ttgtctcacaaccatctgtcatgggacac-gattccaccttatggtgtgtctgaag 801

                                                                       
Query: 299 acaatgacagtatacccacatacatgaaatagaacctatgtgactcacaaattacaccaa 358
           |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 800 acaatgacagtatacccacatacatgaaatagaacctatgtgactcacaacttccaccaa 741

                                                                       
Query: 359 taactcaagggggattcagatgtaac---ccccgaaatcaaatatgttagaaactcccca 415
           ||||||||||||| |||||||||| |   |||| ||||||||||||||||||||||||||
Sbjct: 740 taactcaagggggtttcagatgtacccctccccaaaatcaaatatgttagaaactcccca 681

                                                                       
Query: 416 gtattgaaggcagcattatcatatgagaaccagaaacctcagaatttcgttaatttccct 475
           |||||||||||||| ||| |||||||||||||||| |||||||| ||| |||||| ||||
Sbjct: 680 gtattgaaggcagccttaacatatgagaaccagaaccctcagaaattctttaattcccct 621

                                                                       
Query: 476 cagaattaccacttcagaacaaaggtgtcacagaggtcctcaataactgaagatgccctg 535
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 620 cagaattaccacttcagaacaaaggtgtcacataggtcctcaataactgaagatgcccgg 561

                                        
Query: 536 atacatatgacatgataagcaaaggactt 564
           |||||||||||||||||||||||||||||
Sbjct: 560 atacatatgacatgataagcaaaggactt 532


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 976
Length adjustment: 10
Effective length of query: 563
Effective length of database: 966
Effective search space:   543858
Effective search space used:   543858
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)