NAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAAGGCCCATTTCTCAACATGATAAAAGCAATCTACAGCAAA
CCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATTCCACT
AAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAGCA
TAGTACTTGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAG
GGGATACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGATGA
TATGATAGTATATATAAGTGACCCCAAAAATTCCACCAGAGAACTCCTAA
ACCTGATAAACATCTTCGGTGCAGTAGCTGGATATAAAATAAACTCAAAC
AAGTCAATGGCCTTTCTCTATACAAAGAATAAACAGACTGAGAAAGTAAT
TCGGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAAATATCTTG
GTGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAG
TCTCTGAAGAAAGAAAGTAAAGAAGATCTCAGAAGATGGAAGGATCTCCC
ATGCTCATAGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAA
AAGCAATCTACCGATTCAATGCAATCCCATTCAAAATTCCCACTCAGGTC
TTCAACGAATTAGAAGGAACCATTTGCTAATTCCTCTGGAATAACCAAAA
TCTAGGATAGCA

CGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATGGGCAAAAAGTTTCAGTTTAATGA
AATATGAAGAGTAAAGTCATAAATAGAAAACAGCAGTGATGCTACCTCAA
GAATTAAATTAAACTTTCTACTGTATTTACCTTTTCTATTTCACAACTCT
CATTATCCCATAACTCTTGCTATCACTTAAAATTAGATATCTTGTAAAAA
ATATTGCGTTTGATGGTATGTTTTTAAAAGTATTAATGTGATGTAGCACA
ATCACAAAATTAAAATATTTTAAATTGATATTTTGAACAATCTCTTCACA
CAGCAATCTGTATTTAAACCAAACTGGTAGGTCATAATTTATGTGTTTTA
CACATCAGTTTGGAAAACACTAAAGCATTATACTCAGTCAACTCGATGTG
AATTATATTTTTGCCAATGTATGTTTTCCACAGTTTATATTCAGTTATGC
ACATAATGTAAAGATGTTTGTAAGTAGAATTTCCTTACATGCCTACATAA
TAGCCTGGTTTTATGATAGTCTAAAATGTGGCTAGATTACCTAGTTTTCT
TTGGGACTTTTCTACCTCCGGCTAAAAGGAGCCTGATATGAAATCCTTTG
CATCCTCCTAATAATAGTGTTATATTGGTTTATATATCTTAACCTAAAAG
TTTCTCTGCCTCCAGTGGGAATTGTAGGTAGTTTCCCACAATTATTTCAC
TTTTTATTTGATTTAACCCTTCTTTN

Query= MSMg01no414_c14.g1 MSMg01no414_c14.g1 CHROMAT_FILE:
MSMg01no414_c14.g1 PHD_FILE: MSMg01no414_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:05 2005
         (463 letters)



>mm_chrX_107999676_108000538
          Length = 863

 Score =  841 bits (435), Expect = 0.0
 Identities = 456/467 (97%), Gaps = 8/467 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggcaaaaagtttcagtttaatgaaatatgaagagtaaagtcataaatagaaaacagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgggcaaaaagtttcagtttaatgaaatatgaagagtaaagtcataaatagaaaacagc 260

                                                                       
Query: 61  agtgatgctacctcaagaattaaattaaactttctactgtatttaccttttctatttcac 120
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 agtgatgctacctcaagaattaaattaaactttctactgtatttacctttcctatttcac 320

                                                                       
Query: 121 aactctcattatcccataactcttgctatcacttaaaattagatatcttgtaaaaaatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 aactctcattatcccataactcttgctatcacttaaaattagatatcttgtgaaaaatat 380

                                                                       
Query: 181 tgcgtttgatggtatgtttttaaaagtattaatgtgatgtagcacaatcacaaaattaaa 240
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgtttgatggtatgtttttaaaagtattaatgtgatgtagcacaatcacaaaattaaa 440

                                                                       
Query: 241 atattttaaattgatatttt----gaacaatctcttcacacagcaatctgtatttaaacc 296
           ||||||||||||||||        ||||||||||||||||||||||||||||||||||||
Sbjct: 441 atattttaaattgata----caaagaacaatctcttcacacagcaatctgtatttaaacc 496

                                                                       
Query: 297 aaactggtaggtcataatttatgtgttttacacatcagtttggaaaacactaaagcatta 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aaactggtaggtcataatttatgtgttttacacatcagtttggaaaacactaaagcatta 556

                                                                       
Query: 357 tactcagtcaactcgatgtgaattatatttttgccaatgtatgttttccacagtttatat 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tactcagtcaactcgatgtgaattatatttttgccaatgtatgttttccacagtttatat 616

                                                          
Query: 417 tcagttatgcacataatgtaaagatgtttgtaagtagaatttcctta 463
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tcagttatgcacataatgtaaagatgtttgtaagtagaatttcctta 663


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space:   386409
Effective search space used:   386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)