NNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAATCTGTCTGATTTATGATTGGAGAAAAGCAAATTAAAAAT
CACATTAGGATTATTTCTCAGCCTTTTGGCTAAAATCAAGTGTAGTGTGT
TATCGGTGTATCCAATGTATCCTCTAGCCAAGAGCAGTATGTTACACGGA
TTTTTGGAGCTAAGAGATGGACTAGGAGCAGTTTCTGTCCACTGCACGCA
TCGACCTGGTACTTCAGTTCCTCCAGGAACAGTGCACCACCTTTGGAGAA
TGTGAATGAATGAATAAACCAACTAGCTTTTGTAAAAACATGACAATAGT
AAGTGTCGAAATGAATGCAGAACTCGAACTTTCTTACATTGCTGGAAGAA
AGACCATAGAGTCATTTTGGAAAGCTGACAATCTCACAGGTAGATAAACG
TCAGGAGTATCACACAAACCAGCATTTAAGATCCTCAGACATTTTCACCA
TAAGGAAAATACTAGTGATGACAAAAGCTTGAACAAGAACATTCAGAATA
GCTTTAATTTTAATTCCAAAACTGGGAACAGTTCAAATGACCTTGAGAAG
TTAATGGCTATGATGCCCTAGAACTCAAAAATGAAAAGAAGCATGAATCA
CAAATATTTTCGAGACAGAATCTTACAGTGCTGCCCAGGCTGGAGTGCAA
CTTACTATGTAGACCAGGCTGGCACTGACCTTTAAAAGAATCACTTGCTT
CTGGCTC

NACCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTTAGCCAGTAGAAGC
AGAAGGGTTAAGGAGTTCAAGGCCATTTTATGCTACATAGTGAGTTTGAA
GCCACCTCAGACTATATGAGAGACCCTGTCTCAAGGAAACAAATATTCAC
ACATTTGTATTATTTCAGAAAGATGCCCACAATATAACTTGTTGTTAGCA
CAATTTCTGGGATTTTATTAAAATGATGTTACTCATACCTAATATTTATT
TTCTGTAAAAAGATAAATATATTTATTGGATTTCTGATTTGACAGATAAT
TTTTGCCAGGCATAGGTGATACACATCTATACTCCAAACACTGAGGAGGC
AAGATCATCTCAGATTGGGGGGTCATTCGCTGCTACATTGTGAGACCGTG
TCCCAAAAATAATAAAAATAAACCTTTCATTATAAGATATATCTATTAAT
GTATTAGTAAATAATACACTGTGATGTCTTTATTTTCTAGATTTATTTTT
AAAGTATTTTTATTATTTCATGTATGTCTATGTTCATATGTATGTGTGTG
TATGTATATATGTATGTATGTACATATTATGTGTCTTAANGTTTTGTTGC
TGTGAAAANGNNACCTGTCCTTTGCAACTCTTATGAAAAAAACATTTACT
TGGGGTGGAGGAATTTTATAGAATCGTCTGTTATTATCTGCCGCGAGAAT
GAAACATAA

Query= MSMg01no414_n21.g1 MSMg01no414_n21.g1 CHROMAT_FILE:
MSMg01no414_n21.g1 PHD_FILE: MSMg01no414_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:03 2005
         (488 letters)



>mm_chrX_103171780_103172667
          Length = 888

 Score =  928 bits (480), Expect = 0.0
 Identities = 486/488 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   acttagccagtagaagcagaagggttaaggagttcaaggccattttatgctacatagtga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 acttagccagtagaagcagaagggttaaggagttcaaggccattttatgctacatagtga 522

                                                                       
Query: 61  gtttgaagccacctcagactatatgagagaccctgtctcaaggaaacaaatattcacaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gtttgaagccacctcagactatatgagagaccctgtctcaaggaaacaaatattcacaca 462

                                                                       
Query: 121 tttgtattatttcagaaagatgcccacaatataacttgttgttagcacaatttctgggat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tttgtattatttcagaaagatgcccacaatataacttgttgttagcacaatttctgggat 402

                                                                       
Query: 181 tttattaaaatgatgttactcatacctaatatttattttctgtaaaaagataaatatatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tttattaaaatgatgttactcatacctaatatttattttctgtaaaaagataaatatatt 342

                                                                       
Query: 241 tattggatttctgatttgacagataatttttgccaggcataggtgatacacatctatact 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 341 tattggatttctgatttgacagataatttttgccaggcataggtgatacacacctatact 282

                                                                       
Query: 301 ccaaacactgaggaggcaagatcatctcagattggggggtcattcgctgctacattgtga 360
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tcaaacactgaggaggcaagatcatctcagattggggggtcattcgctgctacattgtga 222

                                                                       
Query: 361 gaccgtgtcccaaaaataataaaaataaacctttcattataagatatatctattaatgta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gaccgtgtcccaaaaataataaaaataaacctttcattataagatatatctattaatgta 162

                                                                       
Query: 421 ttagtaaataatacactgtgatgtctttattttctagatttatttttaaagtatttttat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ttagtaaataatacactgtgatgtctttattttctagatttatttttaaagtatttttat 102

                   
Query: 481 tatttcat 488
           ||||||||
Sbjct: 101 tatttcat 94


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space:   419684
Effective search space used:   419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)