Query= MSMg01no415_j10.b1 MSMg01no415_j10.b1 CHROMAT_FILE:
MSMg01no415_j10.b1 PHD_FILE: MSMg01no415_j10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:01 2005
(532 letters)
>mm_chrX_82118440_82119371
Length = 932
Score = 598 bits (309), Expect = e-175
Identities = 327/333 (98%)
Strand = Plus / Plus
Query: 1 atttggagtcagggtaaacgagttctgaatgtaagcaatcaggaattcaatatgaacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttggagtcagggtaaacgagttctgaatgtaagcaatcaggaattcaatatgaacatg 260
Query: 61 aagtgaggaaaccaaacatcttagaaatataaacctctctaagtccaacatcttctaaat 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtgaggaaaccaaacatcatagaaatataaacctctctaagtccaacatcttctaaat 320
Query: 121 gaagttggccaaagctgatatctatctggaaactctgagtggccctagaattgtagccac 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagttggccaaaactgatatctatctggaaactctgagtggccctagaattgtagccac 380
Query: 181 ttaagatgggtttctagctggtgcatgcgttcatgtgtacttcccaagctttcctcagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaagatgggtttctagctggtgcatgcgttcatgtgtacttcccaagctttcctcagtt 440
Query: 241 ggaaaatgttatctaaagtgaatgattaaataacttttttaccaagctcctttattagtg 300
||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaaaatgtcaccaaaagtgaatgattaaataacttttttaccaagctcctttattagtg 500
Query: 301 aatctattgtgtgttttagaaacgtatattttt 333
||||||||||||||||||||||| |||||||||
Sbjct: 501 aatctattgtgtgttttagaaacatatattttt 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_j10.g1 MSMg01no415_j10.g1 CHROMAT_FILE:
MSMg01no415_j10.g1 PHD_FILE: MSMg01no415_j10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:01 2005
(469 letters)
>mm_chrX_82228302_82229169
Length = 868
Score = 814 bits (421), Expect = 0.0
Identities = 457/471 (97%), Gaps = 5/471 (1%)
Strand = Plus / Minus
Query: 1 aggtttttacatgtgcaaatcagatgtatttgttaagtgtcatttcctataagccaagcc 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 668 aggtttttacatgtgcaaatcagatgtatatgttaagtgtcatttcctataagccaagcc 609
Query: 61 acatgagacaagagaaattcaacaacagttctagaataggaggatggagatgtgacagag 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 608 acatgagacaagagaaattcagcaacagttctagaataggaggatggagatgtgacagag 549
Query: 121 ctgtacaaaggacacttgatgttcttatggagggcccaggtttccttttcatcacttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ctgtacaaaggacacttgatgttcttatggagggcccaggtttccttttcatcacttaaa 489
Query: 181 ttgtagcttcctctcttatgacctctacaacaatcggcataaacagtacacaaacataca 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 488 ttgtagcttcctctcttatgacctctacaacaatcggcataaacactacacaaacataca 429
Query: 241 taattgtttta--gtattcatacacacaaaataaaatagttaaaaaataacaacaaggtt 298
||| || | ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 428 taaaggt---aaagtattcatacatacaaaataaaatagttaaaaaataacaacaaggtt 372
Query: 299 ttaaactgaaaatggtttttaaatattagagtttctgtctaaagggtataagagatgtat 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttaaactgaaaatggtttttaaatattagagtttctgtctaaagggtataagagatgtat 312
Query: 359 tcaattcatgaatacaaattgatacagaggtgaatgagatttagtttagtagaagagctc 418
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 311 tcaattcatgaatacaaattgatacagaggtgaatgagatttagtttagtggaagagctc 252
Query: 419 ttgcctaggcactgggccccctgttcagcatgggggaaaatgtttcctaag 469
|||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 251 ttgcctaggcactgggtcccctgttcagcaggggggaaaatgtttcctaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 868
Length adjustment: 10
Effective length of query: 459
Effective length of database: 858
Effective search space: 393822
Effective search space used: 393822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
