Query= MSMg01no415_o07.b1 MSMg01no415_o07.b1 CHROMAT_FILE:
MSMg01no415_o07.b1 PHD_FILE: MSMg01no415_o07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:24 2005
(156 letters)
>mm_chrX_113031087_113031642
Length = 556
Score = 281 bits (145), Expect = 2e-80
Identities = 151/153 (98%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 1 aaaggaaaagaaagttataagaaattgcatttacagaataatttacatttggatttacag 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 aaaggaaaagaaagttataagaaattgcattcacagaataatttacatttggatttacag 260
Query: 61 aataataatactagctagttttgggagtgattttcttaaaggaaaagaagcaaatatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataataatactagctagttttgggagtgattttcttaaaggaaaagaagcaaatatttg 320
Query: 121 tgagagagagagagagagagagagagagagaga 153
||||||||||||||||||||||||||||||||
Sbjct: 321 -gagagagagagagagagagagagagagagaga 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 556
Length adjustment: 8
Effective length of query: 148
Effective length of database: 548
Effective search space: 81104
Effective search space used: 81104
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no415_o07.g1 MSMg01no415_o07.g1 CHROMAT_FILE:
MSMg01no415_o07.g1 PHD_FILE: MSMg01no415_o07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:24 2005
(549 letters)
>mm_chrX_113210629_113211576
Length = 948
Score = 801 bits (414), Expect = 0.0
Identities = 435/442 (98%), Gaps = 1/442 (0%)
Strand = Plus / Minus
Query: 2 ttcccctgtgaaggtttgcacgtcttacttttgggttatcagttagatttttaaaaatta 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcccctgtgaaggtttgcacgtcttacttttgggttatcagttagatttttaaaaatta 382
Query: 62 actggttcatatatttaatcagaatatacatacagactaagagatgaaatatgaggatct 121
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 actggttcatatatttaatcagaatatacataaagactaagagatgaaatatgaggatct 322
Query: 122 ttctttgtcttctacaggtgactgagtttgatttttttttagaaataataaacagaaagt 181
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 ttctttgtcttctacaggtgactgagtttga-ttttttttagaaataataaacagaaagt 263
Query: 182 gaattttagtgatttgatttcacaaatggaaaagccacatgactgaagtatataaaaatt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gaattttagtgatttgatttcacaaatggaaaagccacatgactgaagtatataaaaatt 203
Query: 242 tttttttgacactttaattttgatagatacatgttaatataccaaagagaaaatatcaaa 301
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 taattttgacactttaattttgatagatacatgttaatataccaaagagaaaatatcaaa 143
Query: 302 taggtaattgtatttataaaattgataggtgaaagttgcagacaatatatatacattttt 361
||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 142 taggtaattatatttataaaattgataggtgaaagttgcagacactatatacacattttt 83
Query: 362 gactcatcagtacatgagccttaaagctatgaaagtcaaccaagaggtgttttctttttc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 gactcatcagtacatgagccttaaagctatgaaagtcaaccaagaggtgttttctttttc 23
Query: 422 ttttccttttatttttgctttg 443
||||||||||||||||||||||
Sbjct: 22 ttttccttttatttttgctttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 948
Length adjustment: 10
Effective length of query: 539
Effective length of database: 938
Effective search space: 505582
Effective search space used: 505582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
