Query= MSMg01no416_g15.b1 MSMg01no416_g15.b1 CHROMAT_FILE:
MSMg01no416_g15.b1 PHD_FILE: MSMg01no416_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:02 2005
(528 letters)
>mm_chrX_106348986_106349913
Length = 928
Score = 746 bits (386), Expect = 0.0
Identities = 393/396 (99%), Gaps = 3/396 (0%)
Strand = Plus / Minus
Query: 44 aaaaa-aaaa--aaaaaccctgttaagcagctccaagcagaaatggttggtatgccattg 100
||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aaaaacaaaatcaaaaaccctgttaagcagctccaagcagaaatggttggtatgccattg 337
Query: 101 gaaaatgtttttatcaccagcttgcaaaatctcagttggtttgtattcatcttaatttaa 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gaaaatgtttttatcaccagcttgcaaaatctcagttggtttgtattcatcttaatttaa 277
Query: 161 aataaagagagtgagatttaaaaaaaaaacacaaacaaagcattattagaaaataaataa 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aataaagagagtgagatttaaaaaaaaaacacaaacaaagcattattagaaaataaataa 217
Query: 221 ataaataaataaatttaattaaacctccaaaaatatcagtaaatttattttgtaattgct 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ataaataaataaatttaattaaacctccaaaaatatcagtaaatttattttgtaattgct 157
Query: 281 tctggttttgtgtttttatgagatttccatgtgtgtgagtgtgtgtacatctgaagctat 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tctggttttgtgtttttatgagatttccatgtgtgtgagtgtgtgtacatctgaagctat 97
Query: 341 atatgtgtttttgtgctttctttttgactgtatttttccttgtctgttttgtcctttgat 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atatgtgtttttgtgctttctttttgactgtatttttccttgtctgttttgtcctttgat 37
Query: 401 ggtttgtttgctttcatcatattgcattttacttga 436
||||||||||||||||||||||||||||||||||||
Sbjct: 36 ggtttgtttgctttcatcatattgcattttacttga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_g15.g1 MSMg01no416_g15.g1 CHROMAT_FILE:
MSMg01no416_g15.g1 PHD_FILE: MSMg01no416_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:02 2005
(611 letters)
>mm_chrX_106242901_106243911
Length = 1011
Score = 1181 bits (611), Expect = 0.0
Identities = 611/611 (100%)
Strand = Plus / Plus
Query: 1 aatatgtatttatttgtgagtacagagaggtggttatgtttgaaaagagaaaagacctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatatgtatttatttgtgagtacagagaggtggttatgtttgaaaagagaaaagacctag 260
Query: 61 aactaatttggcttggattttcttttgttttgtttgccaagtgtgattgaagtcattgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactaatttggcttggattttcttttgttttgtttgccaagtgtgattgaagtcattgaa 320
Query: 121 tccactgtaaaacttctgcatgctacaaaagacttccaaatttagcagcctatctagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccactgtaaaacttctgcatgctacaaaagacttccaaatttagcagcctatctagaaa 380
Query: 181 caatctgtaataccaagcacatagagttaatgaacaaagacttcctgtttcaagaaccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatctgtaataccaagcacatagagttaatgaacaaagacttcctgtttcaagaaccag 440
Query: 241 ataacagatttgtgggaagaaactacaagtaactgattatttcatctatcatgctcaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataacagatttgtgggaagaaactacaagtaactgattatttcatctatcatgctcaaaa 500
Query: 301 ttcaagccccattttcattgctgcttagatattttaggatgaagtctactttttttttag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcaagccccattttcattgctgcttagatattttaggatgaagtctactttttttttag 560
Query: 361 ttggatattttatttatttacatttcaagtgttattccctttctccgtttcttttctgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttggatattttatttatttacatttcaagtgttattccctttctccgtttcttttctgca 620
Query: 421 aaccccctattccaacccccttaccctatttctatgagggtgctctcccacccacccact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaccccctattccaacccccttaccctatttctatgagggtgctctcccacccacccact 680
Query: 481 cctgcctcactgtcctagcattcctctacactggggcatcaagcctacacaggaccaagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctgcctcactgtcctagcattcctctacactggggcatcaagcctacacaggaccaagg 740
Query: 541 gtatccccttccactgatgccagataaggccccttcagctccttcactgcttcccctaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtatccccttccactgatgccagataaggccccttcagctccttcactgcttcccctaac 800
Query: 601 tcctccattgg 611
|||||||||||
Sbjct: 801 tcctccattgg 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
