NCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCTTATAATCCTCAAGGACAAGGCAATGTGGAATGGGCCTATG
GAACTTTAAAACAATAACTTCATAAAATTAAAAATGGGGAATTATACCCC
CCTGTATACCACAAAACTTTTTAAATCATGCTCTTTTATTTTAATTTTTT
TAAAAAAAATTTAGATATGCATGGACATTCAACAGCTGAGCATTTTTGTC
ATCCTAACACTTCAACTACGTATACTTCAGTGAAGCGGAAGGATCCCATG
AAAGGCCAATGGCATGGACAGGACCCTGAACTCATATGGGGACAAGGTCA
CATTTAGGTTTTTTCACAGGAAGAAAATGGGGCTCAGTGGTTGCCAGAGA
GGCTGGTGCAACAAATGGAACAACCCCATGCTCCTGCTGATTCCCCTACT
GATGATGATGTTTCCTGCACATGGTGAAGCCCACTGGGCCTATGTTCCTG
ACCTACTACTGATACATCCAGCAGTATGGACCAGACTGGAGGTTCTTGTC
ACCAGTAACAATACTCAACTTCTTGGACCCCCTTGGACAAGGGATTCAAT
TTATAATAAGGCTGTGACTTTCAATTCATTGGGTAATGGGATTCTTATTA
GCTTTGTGAAGAATAGTACAAATGATGGGTGTATTTCAGTGTTTCCTCAA
ATGTGGATGAAAAAAGCTTCCAAACTGTAACTCAAATCATAAA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATTGCTAACCCTAGTGTCCAAAGCA
CATGACAACAGTAAAGATCCTATCTTGCCCCTCCCACCATATGATTAACG
TCATTAATAAATTTTCTGCTGTCTCAAGCAAATTCATTGGAGGTTAAATA
CCTTAACATTCAGCTGGATGGTGATGGCTCATGCCTTTAATCCCAGAACT
CAGGAGGCAAATCTAGGCATATCTCTGAGTTTGAGGTCAGCCTGGTCTAT
ATAGTATGTCTCAGGACAGCCATGTCTACAGGGAGAGATCCTGTCTTGGA
AAACAAATAAAATAATACAAATATAAATATAAACAAAACAATGCAACATT
CTTAACTGGAAAGTATTTGGATATAGATGCTGAATGAAAGCCTTTTCTAA
AGCTAAACTATATGCTGTCAGCAATTGGTAATTTATCTCCACAATACAAT
AATAAGAAATACTGAAACTATGTGTACTTCCGTCTGATAGCACATAAGTC
ATTAATATACCATACAGAATCAAAAATAATTGTCAGGGTATTCCTTCTAA
ATAANATAATAATAATAAAAATAATTCCTTCTAAAGGCTCAGAATAATTT
GTCCTGTGTGTCCTTTGCCTCCACTTGTTTTTTTTCTTCAACACAAACAA
AGTACTTTTCACGAAAAAAAAATTATAAATTGGAGGCTTGN

Query= MSMg01no418_b13.b1 MSMg01no418_b13.b1 CHROMAT_FILE:
MSMg01no418_b13.b1 PHD_FILE: MSMg01no418_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:12 2005
         (562 letters)



>mm_chrX_4282977_4283938
          Length = 962

 Score =  971 bits (502), Expect = 0.0
 Identities = 547/562 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaggcaatgtggaatgggcctatggaactttaaaacaataacttcataaaattaaaaat 60
           ||||||| ||||||||||| ||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 201 caaggcattgtggaatgggtctatggaactttaaaacaataccttcataaaataaaaaat 260

                                                                       
Query: 61  ggggaattatacccccctgtataccacaaaactttttaaatcatgctcttttattttaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggaattatacccccctgtataccacaaaactttttaaatcatgctcttttattttaat 320

                                                                       
Query: 121 ttttttaaaaaaaatttagatatgcatggacattcaacagctgagcatttttgtcatcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttttaaaaaaaatttagatatgcatggacattcaacagctgagcatttttgtcatcct 380

                                                                       
Query: 181 aacacttcaactacgtatacttcagtgaagcggaaggatcccatgaaaggccaatggcat 240
           |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 381 aacacttcaactacgtatacttcagtgaagtggaaggatcccatgacaggccaatggcat 440

                                                                       
Query: 241 ggacaggaccctgaactcatatggggacaaggtcacatttaggttttttcacaggaagaa 300
           ||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 ggacaggaccctgtactcgtatggggacaaggtcacatttgggttttttcacaggaagaa 500

                                                                       
Query: 301 aatggggctcagtggttgccagagaggctggtgcaacaaatggaacaaccccatgctcct 360
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 aatggggctcagtggttgccagagagggtggtgcaacaaatggaacaaccccatgctcct 560

                                                                       
Query: 361 gctgattcccctactgatgatgatgtttcctgcacatggtgaagcccactgggcctatgt 420
           ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 gctgattcccctacttatgatgatgattcctgcacatggtgaagcccactgggcctatgt 620

                                                                       
Query: 421 tcctgacctactactgatacatccagcagtatggaccagactggaggttcttgtcaccag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcctgacctactactgatacatccagcagtatggaccagactggaggttcttgtcaccag 680

                                                                       
Query: 481 taacaatactcaacttcttggacccccttggacaagggattcaatttataataaggctgt 540
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 taataatactcaacttcttggacccccttggacaagggattcaatttataataagactgt 740

                                 
Query: 541 gactttcaattcattgggtaat 562
           |||||||||| |||||||||||
Sbjct: 741 gactttcaatgcattgggtaat 762


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space:   525504
Effective search space used:   525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)