Query= MSMg01no418_c23.b1 MSMg01no418_c23.b1 CHROMAT_FILE:
MSMg01no418_c23.b1 PHD_FILE: MSMg01no418_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:19 2005
(490 letters)
>mm_chrX_75638161_75639050
Length = 890
Score = 835 bits (432), Expect = 0.0
Identities = 473/488 (96%), Gaps = 4/488 (0%)
Strand = Plus / Minus
Query: 7 attcctgatcttttc-acacttttatcatgaatgggtgttggatcttgtcaaatgctttt 65
||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 attcctgatctttccaaaacttttatcatgaatgggtgttggatcttgtcaaatgctttt 831
Query: 66 tctgcatctaacgagatgatcatgtggtttttgtctttgagtttgttactttttaataat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 tctgcatctaacgagatgatcatgtggtttttgtctttgagtttgttactttttaataat 771
Query: 126 ttaactggaagcagagtgggatgaattttatatctagacgtacagtttctgcaggtatag 185
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 770 ttaactggaagcagagtgggatgaattttatatctagacatacagtttctgcaggtatag 711
Query: 186 caaaaat---aaaaaaaccaaacaaacaaatcaaaaaacaaacaaacaaaatcagaaaac 242
||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 710 caaaaataaaaaaaaaactaaacaaacaaatcaaaaaacaaacaaacaaaaccagaaaac 651
Query: 243 caatcagaataggactaaacaatatttcatggctaggttttatttcccagtacaacctta 302
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 650 caatcagaataggactaaacaatatttcatggctaggggctatttcccagtacaacctta 591
Query: 303 ctgaattcttcatgacctgagactatttattacccagcaattccttaggaaatatcatct 362
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 590 ctgaattcttcatgacctgagactatttattacccagcaattccttagaaaatatcatct 531
Query: 363 taccaggtcttattgatcatttacagtcgcatcccatactacctaaatgctatctatcaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 taccaggtcttattgatcatttacagtcgcatcccatactacctaaatgctatctatcaa 471
Query: 423 gtaatagctcttaaagtttctgaggtaggagataggagtgtgtgtgtgtgtgtgtctgtg 482
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 470 gtaatagctcttaaagtttctgaggtaggagataggtgtgtgtgtgtgtgtgtgtgtgtg 411
Query: 483 tgtgtgtg 490
||||||||
Sbjct: 410 tgtgtgtg 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_c23.g1 MSMg01no418_c23.g1 CHROMAT_FILE:
MSMg01no418_c23.g1 PHD_FILE: MSMg01no418_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:19 2005
(452 letters)
>mm_chrX_75426104_75426954
Length = 851
Score = 859 bits (444), Expect = 0.0
Identities = 450/452 (99%), Gaps = 1/452 (0%)
Strand = Plus / Plus
Query: 1 catggaacattaatgtcagagagaagaataagtaaaaggaagaaggaaatacttaaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catggaacattaatgtcagagagaagaataagtaaaaggaagaaggaaatacttaaaaac 260
Query: 61 ctttcctgatttgacctccaggtgaatgggtgacgcatgttgcttaggattagacaagaa 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 ctttcctgatttgacctccaggtgaatgggtgacgcatattgcttaggattagacaagaa 320
Query: 121 tccaaaacctaagggaagtgttgaggttggagactctggggtgacggtcactcaactgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccaaaacctaagggaagtgttgaggttggagactctggggtgacggtcactcaactgaa 380
Query: 181 aataaagactttacttttggaagcctcatggttgactcaacttggcacaattttaacgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataaagactttacttttggaagcctcatggttgactcaacttggcacaattttaacgtc 440
Query: 241 agggttttaaaaaaaacaatttatttctcacttataatgtagaggagttaaatgtagata 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agggttttaaaaaaa-caatttatttctcacttataatgtagaggagttaaatgtagata 499
Query: 301 ttaatgtggaaataataaaaatactatgtccaaaggaaaatgtaaaggagattgttagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttaatgtggaaataataaaaatactatgtccaaaggaaaatgtaaaggagattgttagtg 559
Query: 361 gatattcagaaggaagattctagaagaatgagagaaacattttattaatcattaactcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gatattcagaaggaagattctagaagaatgagagaaacattttattaatcattaactcat 619
Query: 421 ttgttgatgaatatgaatatctgcgatcaaaa 452
||||||||||||||||||||||||||||||||
Sbjct: 620 ttgttgatgaatatgaatatctgcgatcaaaa 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 851
Length adjustment: 10
Effective length of query: 442
Effective length of database: 841
Effective search space: 371722
Effective search space used: 371722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
