XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCACC
TGATGCACTACTGAATGGCTGAGAAGCACCTGAAAAAAATGTTCAGCATC
CTTAATCATCAGGGAAATGCAAACCAAAACAACCCTGAGATTCCACCTCA
TACCATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAACAAACACAGAA
GTGGATGCTCACAGTCAGCTATTGGATGGGTCACACGGCCCCCAATGGAG
GAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGGC
GGAACAACAATATGAACTAACCAGTACCCCGGAGCTCTTGTCTCTAGCTG
CATATGTATCAAAACATGGCCTAGTCAGCCATCACTGGAAAGAGAGGCCC
TTTGGACTTGCAAACTTTATATGCCCCTTACAGGGGAACGACAGGGCCAA
AAAGGTGGAGTGGATGGGTAGGGGATTGGGGGTGNNNNNNNNNNNNNNNN
NNNNNNNNNNTNNNNTNNTNTNTNNNNTTTGTTTNTTTTTTTTTTTTTTT
TTTTTTTTNTTTTNNTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTGTTNTTTTTTTTTTTTTTTTTTTTNTTTTTTTTNNNTTTTTT
NNTTTTTTTTTTGTTTGNTTTTGTTTTTGTTGTTGTTTGTTTTTTGTTTG
GTTGTTTTTGTTGTGTTTTTTTTTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTTATTCAATAAAGCCTTTTGAGAGTGGTGCATAT
GTATTTCTTCTCCGAGATCCTCTGAGTGATCTTTGGAACTCTTCATTGGG
GCATCTTCATTTAAGCAAACTAAGGTGGGTGTGGTGGTTTGTGGAAGCCA
AGGCAATTGCAGAGTGTCCTAGGCTCTAGGCTAGCTCGGACTGCAGTGTG
AGACACATCCCCATCTCCTGCCCACAAAACTCAATGCACTGTAATCACAG
TTTTTGGACTTCAGGTTGAATGACTGACACTGTTCCAGGAACAGCATCCT
TCATCTCATGTAACAGAATCCATGACTTTGAGATATGCAAAAAGAATGTA
CTTAGGTTTTTTCCCTTCCCTTTTAAGGGATGCACTCTTCATCATTAAGT
ATCTTCCCACGCCGGGGAACTCAGGGGAATGGAGAACACAGGGAACGAAT
CATCAAAGCTGCAGTTTATAACATCTTGTTCGGACAGTTGGTACAGTCTC
ATTTGGAAAACCCAGTCTCTTAGTTAAATGATGAGTTCTAGGTTTTCTTT
TAGAAGTACATTGTGAAGATTAATCAGTTATGAAGTAATGTGGCCCTTGT
GTCTTTTGGACACTGCAAAAGTTCTAAAGCGTTTGAATCTGGGCCGTCCT
TATACCTGTTTCACAGTCTTTTTCCCGTGGAGTTTGCTTG

Query= MSMg01no422_n04.g1 MSMg01no422_n04.g1 CHROMAT_FILE:
MSMg01no422_n04.g1 PHD_FILE: MSMg01no422_n04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:21 2005
         (423 letters)



>mm_chrX_157339452_157340274
          Length = 823

 Score =  803 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttattcaataaagccttttgagagtggtgcatatgtatttcttctccgagatcctctga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tttattcaataaagccttttgagagtggtgcatatgtatttcttctccgagatcctctga 564

                                                                       
Query: 61  gtgatctttggaactcttcattggggcatcttcatttaagcaaactaaggtgggtgtggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gtgatctttggaactcttcattggggcatcttcatttaagcaaactaaggtgggtgtggt 504

                                                                       
Query: 121 ggtttgtggaagccaaggcaattgcagagtgtcctaggctctaggctagctcggactgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggtttgtggaagccaaggcaattgcagagtgtcctaggctctaggctagctcggactgca 444

                                                                       
Query: 181 gtgtgagacacatccccatctcctgcccacaaaactcaatgcactgtaatcacagttttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gtgtgagacacatccccatctcctgcccacaaaactcaatgcactgtaatcacagttttt 384

                                                                       
Query: 241 ggacttcaggttgaatgactgacactgttccaggaacagcatccttcatctcatgtaaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggacttcaggttgaatgactgacactgttccaggaacagcatccttcatctcatgtaaca 324

                                                                       
Query: 301 gaatccatgactttgagatatgcaaaaagaatgtacttaggttttttcccttccctttta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gaatccatgactttgagatatgcaaaaagaatgtacttaggttttttcccttccctttta 264

                                                                       
Query: 361 agggatgcactcttcatcattaagtatcttcccacgccggggaactcaggggaatggaga 420
           ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 263 agggatgcactcttcatcattaagtatcttcccactccagggaactcaggggaatggaga 204

              
Query: 421 aca 423
           |||
Sbjct: 203 aca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space:   336996
Effective search space used:   336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)