XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
TTGTTTATCTCTATAACCCATTTTTAATAGGATTATTTTATTCTCTGGAG
TCTATCTTCTTGAGTTCTTTGTATATATTGGATATTATTCCTCTATTGGA
TGTAGGATTGGAAAAGATCTTTTCCCAATCTGGTGCTTGATAATTTGTGT
ATTTAAGTGATCCCAAAAATTCCACCAGAGAACTCCTAAACCTGATGAAC
AACTTCAACAAAGTGACTGGATATAAAATTAACTCAAACAAATTGCTAGC
CTTCCTCTACTCAGAGGATAAACAGGCTGAGAAAGAAATTAAGGAAATGA
CACCCTTCATAATAGTCACAAATAATATTACATACCTTGGTGTGACTCTA
ACCAAGCAAGTGAGAGATCCATACGAGAAGAACTTCACATCTCTGAAGAA
AGAAATGGAAGAAGATCTTAGAAGATGGAAAGATCCCCCATGCTCATGGA
TTGGCAGGATTAATATAGTACAAATGAGCATCTTGCTGAAAGCAATCTAC
AGATTCAATGGAATTCCTGTCAAAAATTCAACTCAGTTCTTCACAGGNTT
AGAAAAGAGAAATTCTCAAATCCTTTGGAATAACAAAAACCCAGGATAGC
AAATACTATTCTCACCGTAAAAGAACTTCTGGGGGGGAAAAACCAATAGT
GGGAAAAACTGTTTGAATTTGGTCACCAAACAGGTAAGAAG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCATCTTCTAAGTAATAGCCACAAAGAAATGT
TAGAGACTAACTAAGAAAAATGAATGAAAATGACCTTTTGTGAAGACTTG
CATCAATTAGATAGAGGAACTCTTCTTTTGAAGATATGTCAATATAATGC
CCCCAAATTTAAACAAAGTGAGAGAAACCAAAAAAATTAAACAATAATAT
CAATTTTAAAAACCAGAAGAGATTATCCTAGGACTGTGGAATTTTTATAG
TAGGAATATAATATATATGCTGGAAAAGATACCAAAAGAAAAAACAGCAA
ATCAGTAATAGATTGTTTTCATTTTGAGTTTATAATTTTGTAGAGGAATT
TTGATCCAGCAACATGATTGCTCTGGCAACTCACATCCAAAACCCTTCTA
GGTCTAGGTGATCTGGCTGCAATGATATACATTTAATGCTGCTGACTGGA
ATATAGACACATCCTTAGTATATAGCTTTATCCCCTAATATTGAAAGTAA
GTTTAGTTTAGTTAGTAGAAGGAAAAGTAATGACTGAAAATAGCTTCTAA
TTGAGGGGCAGACAATGTGATGATTCAGAGAAGATTTGACAAAATGAGTC
AGGATTGGATATGTCTAACACCCGGAGAAAAACCCGGGTAAGAGAGGGTA
CTTAGGAGCAGTACCGGCTTTTCCTTTGA

Query= MSMg01no422_o20.g1 MSMg01no422_o20.g1 CHROMAT_FILE:
MSMg01no422_o20.g1 PHD_FILE: MSMg01no422_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:29 2005
         (468 letters)



>mm_chrX_117108250_117109117
          Length = 868

 Score =  897 bits (464), Expect = 0.0
 Identities = 467/468 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   catcttctaagtaatagccacaaagaaatgttagagactaactaagaaaaatgaatgaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcttctaagtaatagccacaaagaaatgttagagactaactaagaaaaatgaatgaaa 260

                                                                       
Query: 61  atgaccttttgtgaagacttgcatcaattagatagaggaactcttcttttgaagatatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgaccttttgtgaagacttgcatcaattagatagaggaactcttcttttgaagatatgt 320

                                                                       
Query: 121 caatataatgcccccaaatttaaacaaagtgagagaaaccaaaaaaattaaacaataata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatataatgcccccaaatttaaacaaagtgagagaaaccaaaaaaattaaacaataata 380

                                                                       
Query: 181 tcaattttaaaaaccagaagagattatcctaggactgtggaatttttatagtaggaatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaattttaaaaaccagaagagattatcctaggactgtggaatttttatagtaggaatat 440

                                                                       
Query: 241 aatatatatgctggaaaagataccaaaagaaaaaacagcaaatcagtaatagattgtttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatatatatgctggaaaagataccaaaagaaaaaacagcaaatcagtaatagattgtttt 500

                                                                       
Query: 301 cattttgagtttataattttgtagaggaattttgatccagcaacatgattgctctggcaa 360
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgttttgagtttataattttgtagaggaattttgatccagcaacatgattgctctggcaa 560

                                                                       
Query: 361 ctcacatccaaaacccttctaggtctaggtgatctggctgcaatgatatacatttaatgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcacatccaaaacccttctaggtctaggtgatctggctgcaatgatatacatttaatgc 620

                                                           
Query: 421 tgctgactggaatatagacacatccttagtatatagctttatccccta 468
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgctgactggaatatagacacatccttagtatatagctttatccccta 668


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space:   392964
Effective search space used:   392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)