Query= MSMg01no422_p07.b1 MSMg01no422_p07.b1 CHROMAT_FILE:
MSMg01no422_p07.b1 PHD_FILE: MSMg01no422_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:31 2005
(455 letters)
>mm_chrX_111916265_111917119
Length = 855
Score = 818 bits (423), Expect = 0.0
Identities = 441/449 (98%), Gaps = 5/449 (1%)
Strand = Plus / Minus
Query: 5 gaattcctcctgttt---aaggaaatgcagggacaaagagtgtagcaggtcagtcttgag 61
|||||||||||| | |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 666 gaattcctcctg--taaaaaggaaatgcagggacaaagagtgtagcagatcagtcttgag 609
Query: 62 tgcagtgactgactgcgtgacctgctgttgggtctgtgtgtccccaacatgaagcacctc 121
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 608 tgcagtgactgactgcgtgacctgctgttgggtcggtgtgtccccaacatgaagcacctc 549
Query: 122 agagctttgatcagttgctttgttttgtgtcatgtcacagcttgcatgggttgaatgtgt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 agagctttgatcagttgctttgttttgtgtcatgtcacagcttgcatgggttgaatgtgt 489
Query: 182 tgattttataatgaaagtaaagaaaggagattctcctccccacagtgaatagattgttaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tgattttataatgaaagtaaagaaaggagattctcctccccacagtgaatagattgttaa 429
Query: 242 ttggatctttacagagagggggaaatccattttaatgatgaaatagattctgtcaaatca 301
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 428 ttggatctttacagagagggggaaatccattttaatgaggaaatagattctgtcaaatca 369
Query: 302 agaagaaataaatggtcaccagttgcttgttagtgtctctgggttaagcagtgcttaatc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agaagaaataaatggtcaccagttgcttgttagtgtctctgggttaagcagtgcttaatc 309
Query: 362 acattgactaacctcagcgagtctgtggatgagtaatctctactggaacaaaggtttctg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acattgactaacctcagcgagtctgtggatgagtaatctctactggaacaaaggtttctg 249
Query: 422 tgtgtgtttgtgtgtgtgtgtgtgtgtgt 450
|||||||||||||||||||||||||||||
Sbjct: 248 tgtgtgtttgtgtgtgtgtgtgtgtgtgt 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_p07.g1 MSMg01no422_p07.g1 CHROMAT_FILE:
MSMg01no422_p07.g1 PHD_FILE: MSMg01no422_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:31 2005
(524 letters)
>mm_chrX_111715906_111716830
Length = 925
Score = 1000 bits (517), Expect = 0.0
Identities = 523/525 (99%), Gaps = 1/525 (0%)
Strand = Plus / Plus
Query: 1 tttatatatcatgcatgcaaattactgatttaaatgtacaagcatttcaaataagtgata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttatatatcatgcatgcaaattactgatttaaatgtacaagcatttcaaataagtgata 260
Query: 61 gctttttttaaaaaacagaaataatataattgagtttatttcatatatgtattgctttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctttttttaaaaaacagaaataatataattgagtttatttcatatatgtattgctttct 320
Query: 121 atggtcagtctctgtctacacatgagtgcattttcttatgttttaatgcagaaactgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggtcagtctctgtctacacatgagtgcattttcttatgttttaatgcagaaactgtct 380
Query: 181 ggagttaatatgtactgttaagtgtatatcacaaattagttttgtgtaggggtttagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagttaatatgtactgttaagtgtatatcacaaattagttttgtgtaggggtttagatt 440
Query: 241 cacagatctcttcttttcatgaataattatttcttctaacactgtctgttgaaaaaagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacagatctcttcttttcatgaataattatttcttctaacactgtctgttgaaaaaagcc 500
Query: 301 catttcttacattgaacacaatttcttacccttttaaaatgaaatcaatgtgaagtgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catttcttacattgaacacaatttcttacccttttaaaatgaaatcaatgtgaagtgaca 560
Query: 361 tcagaaaaaaaaaa-cagtctgggtaattgtaagaggctttcttgctggtaatcaaagaa 419
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagaaaaaaaaaaacagtatgggtaattgtaagaggctttcttgctggtaatcaaagaa 620
Query: 420 aaatatagtaaaactgtcagaatcaccctgcctgtgctgctaaagaagccagaaatacac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatatagtaaaactgtcagaatcaccctgcctgtgctgctaaagaagccagaaatacac 680
Query: 480 actgtataaaagagtttctgcaacaaattatactggtcaaactgg 524
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actgtataaaagagtttctgcaacaaattatactggtcaaactgg 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 925
Length adjustment: 10
Effective length of query: 514
Effective length of database: 915
Effective search space: 470310
Effective search space used: 470310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
