XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACAACTC
CGCATCCCAAAGACCCACAGGAGCTGGCTCAAGATCCCTTGGGATATATT
CCTCTGGAAGCTTTTAGGTAGTTCTTAAAGCAGGATTTCCACATTTTCAG
CAAAGAAAAACGTGGCACTAGGTGATTCTTTGACAGAGGAACAAAGCTAT
GATCTAGGTCTGAGACAGGGACAACAGGAACATATTTCCTAAGGGAGCTT
TAAAGTCCTCAGTACAAAAGTTTGGGCACCCCTTACTCTGGAGCCTCTCA
TCTAAATCAAGGGGCTCAAAGACTTTCGAGAGGAAAGCAAACAGATGTGA
GTTAGACAATGAGGGCAGCTTCTTTTGAGAATGGGGCCAGTTGTTTACTT
GGTGCCAAATAAGAGGAGTGAGACTGGGGGAATCCCTAGAAGGGTATGGC
TCACAGCAACTCTAGCAGTTCAATGGATTCCAGATACCCGCTCTTGAAAA
GAGACCACACATGTTAGTGTCTCCTATGAGCTCCTTGAGATTTTGTTAGT
ACCCCAAATTTCAACTCTTTATATTAAAAGAGTAGTGAAAAGAGAAGTAT
AGTACAACCTTCCATGGTGGTGGAGAAGGTCCTAATCATGCTGTCCAGGT
GATAGCCTCTGACACTGTAAGGGCTGAGGATATGGGCACACCCTTTTCAA
GCTGAGTTGAAAGGTACACAAACTTCCCATTCTAGAGGG

TTTAAAACNNNNNNNNNTNNNNNNCCCAATGATANTGNNNXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXACTGTATGAGTTTTTTTGTTTTTTTGTTTTTTAAATATAATAAAAA
CAGGTCATGTTTCTGGATTCCCCTGAAGGATCCCTTCNNAACGTTAAACC
CCAAAAAAACCCCCAGGGTTTTTTAAAACTTAATTTACTCCCCAAANGGA
AAACCGANNNNNAAAATCGGGTGGNNNNNNNNNTTTGCCTTTATTTTGAA
AAAAAANCTNNTTTNNNNNTTTAGCTTTGTTTTAGGGGGGNNNNNNTNNN
TTTNNNTTTTTTTTTTTTTGGTGNNNNNNNNNNTGGNATATAGGGGTTTT
CTTTTTTTTTTTTTCTTTTTTTTTTTCTCTTNNNCCCCCTTCTCCTTCTC
TTCCTTCCTTNNNTCCTCCTTCCCCCCTTTTCTCNTCCCCCCCCCCTCTC
CTTNTTTGAAAACCCCCGCCGGCTTCTCGCCNTNTTNTNCCCCCACCAAA
AGGGGGGTTNTTTNTTTCNCCTACATAAGAGAAAACATAAAGGATGAGTC
CTTTCTCCCTTTTTTTCTGCTTTTGCGGGAGACC

Query= MSMg01no423_a16.b1 MSMg01no423_a16.b1 CHROMAT_FILE:
MSMg01no423_a16.b1 PHD_FILE: MSMg01no423_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:37 2005
         (551 letters)



>mm_chrX_156542918_156543868
          Length = 951

 Score = 1048 bits (542), Expect = 0.0
 Identities = 548/550 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcccaaagacccacaggagctggctcaagatcccttgggatatattcctctggaagcttt 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 750 tcccaaagacccacaggagctggctcaagatcccttgggatctattcctctggaagcttt 691

                                                                       
Query: 61  taggtagttcttaaagcaggatttccacattttcagcaaagaaaaacgtggcactaggtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 taggtagttcttaaagcaggatttccacattttcagcaaagaaaaacgtggcactaggtg 631

                                                                       
Query: 121 attctttgacagaggaacaaagctatgatctaggtctgagacagggacaacaggaacata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 attctttgacagaggaacaaagctatgatctaggtctgagacagggacaacaggaacata 571

                                                                       
Query: 181 tttcctaagggagctttaaagtcctcagtacaaaagtttgggcaccccttactctggagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tttcctaagggagctttaaagtcctcagtacaaaagtttgggcaccccttactctggagc 511

                                                                       
Query: 241 ctctcatctaaatcaaggggctcaaagactttcgagaggaaagcaaacagatgtgagtta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 510 ctctcatctaaatcaaggggctcaaagactttcgagaggaaagcaaacagatgtgaggta 451

                                                                       
Query: 301 gacaatgagggcagcttcttttgagaatggggccagttgtttacttggtgccaaataaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gacaatgagggcagcttcttttgagaatggggccagttgtttacttggtgccaaataaga 391

                                                                       
Query: 361 ggagtgagactgggggaatccctagaagggtatggctcacagcaactctagcagttcaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ggagtgagactgggggaatccctagaagggtatggctcacagcaactctagcagttcaat 331

                                                                       
Query: 421 ggattccagatacccgctcttgaaaagagaccacacatgttagtgtctcctatgagctcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ggattccagatacccgctcttgaaaagagaccacacatgttagtgtctcctatgagctcc 271

                                                                       
Query: 481 ttgagattttgttagtaccccaaatttcaactctttatattaaaagagtagtgaaaagag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttgagattttgttagtaccccaaatttcaactctttatattaaaagagtagtgaaaagag 211

                     
Query: 541 aagtatagta 550
           ||||||||||
Sbjct: 210 aagtatagta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space:   509081
Effective search space used:   509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)