Query= MSMg01no425_i24.b1 MSMg01no425_i24.b1 CHROMAT_FILE:
MSMg01no425_i24.b1 PHD_FILE: MSMg01no425_i24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:49 2005
(569 letters)
>mm_chrX_143102022_143102990
Length = 969
Score = 1069 bits (553), Expect = 0.0
Identities = 565/569 (99%)
Strand = Plus / Plus
Query: 1 agagctattgctatagtttacaagtgtttcttaaactactgtatagacaatgtgctatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagctattgctatagtttacaagtgtttcttaaactactgtatagacaatgtgctatag 260
Query: 61 gtcaggaagaggaaggcaaaggaaatggttgggaaactgcaatggtacatttaattgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcaggaagaggaaggcaaaggaaatggttgggaaactgcaatggtacatttaattgatt 320
Query: 121 tgtacctctttctgttagtagacttttagacaaacatgtgccatccttttaaagcactgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtacctctttctgttagtagacttttagacaaacatgtgccatccttttaaagcactgt 380
Query: 181 tagagtgaatataggtaaatttcctcattgtaaagatgcacaatagcatttctgtgaaaa 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagagtgaatataggtaaatctcctcattgtaaagatgcacaatagcatttctgtgaaaa 440
Query: 241 tgtaacagtaatatttctgtgaaaatgtacactgatattattctctactaactgttatgc 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtaacagtcatatttctgtgaaaatgtacactgatattattctctactaactgttatgc 500
Query: 301 ctgtggggaatgatgtatgggtagatatgtgcctcatattctactaacatgaaaaaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtggggaatgatgtatgggtagatatgtgcctcatattctactaacatgaaaaaatta 560
Query: 361 tttttggcattttaattattttaaaaataataaccaatgttattatttttgatggatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttttggcattttaattattttaaaaataataaccaatgttattatttttgatggatcat 620
Query: 421 gctgaggaaataaaaaatgaaccttttgcttaaaaaaaaataaacacatgcttgttggta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctgaggaaataaaaaatgaaccttttgcttaaaaaaaaataaacacatgcttgttggta 680
Query: 481 ctttccatgtcagttactagattagatgactcaaatgttacttcactaagtttctaaagc 540
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 681 ctttccatgtcagttactagattagatgactcaaatgttacttcaataagtttctaaggc 740
Query: 541 agttgtaacaggttttcaccaatttattg 569
|||||||||||||||||||||||||||||
Sbjct: 741 agttgtaacaggttttcaccaatttattg 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_i24.g1 MSMg01no425_i24.g1 CHROMAT_FILE:
MSMg01no425_i24.g1 PHD_FILE: MSMg01no425_i24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:49 2005
(479 letters)
>mm_chrX_143259373_143260251
Length = 879
Score = 808 bits (418), Expect = 0.0
Identities = 443/458 (96%), Gaps = 12/458 (2%)
Strand = Plus / Minus
Query: 1 agctaggggtctctcattaatggttaatgaataattgtttcttgttaatggataatgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agctaggggtctctcattaatggttaatgaataattgtttcttgttaatggataatgatc 399
Query: 61 atatgaggatgcaatatagtgatgattttgtggaaaacttaaatatttgaagcattaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 atatgaggatgcaatatagtgatgattttgtggaaaacttaaatatttgaagcattaaaa 339
Query: 121 tatgatttgaccaaaaacttgataagccatatgttgaaagcatgaacttacttgctatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tatgatttgaccaaaaacttgataagccatatgttgaaagcatgaacttacttgctatta 279
Query: 181 ctatttttatgggatccagagacatttgatgacaaatttctattactataaaatattgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ctatttttatgggatccagagacatttgatgacaaatttctattactataaaatattgtt 219
Query: 241 ttggtttaactatatgttct-t-----------tatatatatatatatatatcattctat 288
|||||||||||||||||| | | ||||||||||||||||||| |||||||
Sbjct: 218 ttggtttaactatatgttatatatatatatatatatatatatatatatatataattctat 159
Query: 289 aaataataagcttaatatggtgtttttggaaaaatatttctatttgggaaaatgaattat 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 aaataataagcttaatatggtgtttttggaaaaatatttctatttgggaaaatgaattat 99
Query: 349 ttatcaattaatgcttaatattggttaacacatccatatatgccacataaaaattatctg 408
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 ttatcaattaatgcttgatattggttaacacatccatatatgccacataaaaattatctg 39
Query: 409 tagtatctttctgtcatctatctctacatgagtatcta 446
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 tagtatctttctgtcatctatctctacatgagtatcta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
