Query= MSMg01no426_j10.b1 MSMg01no426_j10.b1 CHROMAT_FILE:
MSMg01no426_j10.b1 PHD_FILE: MSMg01no426_j10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:11 2005
(468 letters)
>mm_chrX_131126576_131127442
Length = 867
Score = 812 bits (420), Expect = 0.0
Identities = 453/464 (97%), Gaps = 1/464 (0%)
Strand = Plus / Plus
Query: 5 aattctttatagtcttacctttcttgtgagattttgctgatctacagatcaaaagtctcc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aattctttatagtcttaactttcttgtgagattttgctgatctacagatcaaaagtctcc 264
Query: 65 cacaacaaagcctgaccatcttttggagttctaaatgtaagggaatttcaccagaagatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cacaacaaagcctgaccatcttttggagttctaaatgtaagggaatttcaccagaagatg 324
Query: 125 tttacttcatataagtaggccatataattttaagtacctgtttacaaagtgactttaata 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcacttcatataagtaggccatataattttaagtacctgtttacaaagtgactttaata 384
Query: 185 ctatttatgttggacgtgcactgaactgtggtatctaagtgctggcattacgaaatatct 244
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 385 ctatttatgttggacgtgcactgaactgtggtgtctaagtgctggcattacgaaatatct 444
Query: 245 ttgtttttactgtaatgtgtaaacttacctaagatggttttattgctaataaattacaac 304
||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||
Sbjct: 445 ttgtttttactgtaatgtgtaaacttacctaagatggcttcattgataataaattacaat 504
Query: 305 gatctactagatggttaatataaagtctataaagttatatgggatactattgaacacggt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 505 gatctactagatggttaatataaagtctataaagttatatgggatactattgaacacagt 564
Query: 365 aagatcggaatttgaaagatgtaaattgtggaatgaaccaatgtgtagattcaccggtat 424
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagatcagaatttgaaagatgtaaattgtggaatgaaccaatgtgtagattcaccggtat 624
Query: 425 taacatccaagatctaatatgctgaggaaaaagttagactatct 468
|||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 625 -aacatccaagatctaaaatgctgaggaaaaagttagactatct 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 867
Length adjustment: 10
Effective length of query: 458
Effective length of database: 857
Effective search space: 392506
Effective search space used: 392506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_j10.g1 MSMg01no426_j10.g1 CHROMAT_FILE:
MSMg01no426_j10.g1 PHD_FILE: MSMg01no426_j10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:11 2005
(101 letters)
>mm_chrX_131287307_131287807
Length = 501
Score = 195 bits (101), Expect = 5e-55
Identities = 101/101 (100%)
Strand = Plus / Minus
Query: 1 agttacctgagaaaactacatgatcataaaatggcagcataagagcacagtggccaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agttacctgagaaaactacatgatcataaaatggcagcataagagcacagtggccaaacc 242
Query: 61 aaaggaaggagaggagatgaatgggatatggtattgttatg 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaggaaggagaggagatgaatgggatatggtattgttatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 101
Length of database: 501
Length adjustment: 8
Effective length of query: 93
Effective length of database: 493
Effective search space: 45849
Effective search space used: 45849
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
