Query= MSMg01no427_b14.b1 MSMg01no427_b14.b1 CHROMAT_FILE:
MSMg01no427_b14.b1 PHD_FILE: MSMg01no427_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:52 2005
(547 letters)
>mm_chrX_133823363_133824309
Length = 947
Score = 1011 bits (523), Expect = 0.0
Identities = 538/547 (98%), Gaps = 8/547 (1%)
Strand = Plus / Plus
Query: 5 gaattccagatggtttcca----atgttataaagtaaacatagcaggaacatgtgataga 60
||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagatgg----cagtaaatgttataaagtaaacatagcaggaacatgtgataga 260
Query: 61 atgacatataatgtattgtattatatgtgcatacttatactaatttagtctggataataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgacatataatgtattgtattatatgtgcatacttatactaatttagtctggataataa 320
Query: 121 aagatggtattaccaaagatatttcatttgaacaaaaacttgattaacaagaaagaacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagatggtattaccaaagatatttcatttgaacaaaaacttgattaacaagaaagaacct 380
Query: 181 ggcaaccaaacatctgaggggaagatatttgttattgagggaaaacatgtaaaatggacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcaaccaaacatctgaggggaagatatttgttattgagggaaaacatgtaaaatggacc 440
Query: 241 ttaagcagaaacaagtgctacatattttgaagagtatcatgatcgttggtgcaatcatag 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 ttaagcagaaacaagtgctacatattttgaagagtatcatgagcgttggtgcaatcatag 500
Query: 301 aacactggataggaaagagagtggaaggaggcaagagcagactggagttcagtggctagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacactggataggaaagagagtggaaggaggcaagagcagactggagttcagtggctagg 560
Query: 361 aaggcaagaactctataggttctggatataatttatatgtttttctgaaaaaaataggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggcaagaactctataggttctggatataatttatatgtttttctgaaaaaaataggat 620
Query: 421 gttattggtaaattttatgcatcagggttataatggttcttaaaatgttcactgttgact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttattggtaaattttatgcatcagggttataatggttcttaaaatgttcactgttgact 680
Query: 481 ttatgaagaatgaattgtaatagggcaagacaagagacagaagaccaatttgtaatgtta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttatgaagaatgaattgtaatagggcaagacaagagacagaagaccaatttgtaatgtta 740
Query: 541 ttggaaa 547
|||||||
Sbjct: 741 ttggaaa 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_b14.g1 MSMg01no427_b14.g1 CHROMAT_FILE:
MSMg01no427_b14.g1 PHD_FILE: MSMg01no427_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:52 2005
(499 letters)
>mm_chrX_133998790_133999688
Length = 899
Score = 944 bits (488), Expect = 0.0
Identities = 496/499 (99%)
Strand = Plus / Minus
Query: 1 cctcaagaccccaaaatgcatatcatgtggacttgctgattggtatgtattttatgtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 cctcaagaccccaaaatgcatatcatgtggacttgctgattggtatgtattttatgtctg 640
Query: 61 tttccaggcctgcattttcatcaataattactgcttacaattatatcatttcctaaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tttccaggcctgcattttcatcaataattactgcttacaattatatcatttcctaaatgt 580
Query: 121 ttctgctcttttcctgttgcttacaaaggctgactttaatagcatatatagatgcacata 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ttctgctcttttcctgttgtttacaaaggctgactttaatagcatatatagatgcacata 520
Query: 181 tctatatgcatacttatatacataagcagttgtatgttgaaattatatgtacatatggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tctatatgcatacttatatacataagcagttgtatgttgaaattatatgtacatatggta 460
Query: 241 tcagtgtaatatttatagtcattttaggagaattgctatttaagtaagaattgctattta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tcagtgtaatatttatagtcattttaggagaattgctatttaagtaagaattgctattta 400
Query: 301 agtcttatctccctcaagcacaaatactctaaataagacttttacaattaaataattatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 agtcttatctccctcaagcacaaatactctaaataagacttttacaattaaataattatt 340
Query: 361 tctacattgtgatgcccctgtttttttctgcttaaatcaacccccactttactgctccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tctacattgtgatgcccctgtttttttctgcttaaatcaacccccactttactgctccag 280
Query: 421 ctgcctctaggcttanaggggacacagtttggggctataaaatgcttttaggcagtagtt 480
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctgcctctaggcttaaagaggacacagtttggggctataaaatgcttttaggcagtagtt 220
Query: 481 cttaaacttcaccatacat 499
|||||||||||||||||||
Sbjct: 219 cttaaacttcaccatacat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
