Query= MSMg01no427_i07.b1 MSMg01no427_i07.b1 CHROMAT_FILE:
MSMg01no427_i07.b1 PHD_FILE: MSMg01no427_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:25 2005
(254 letters)
>mm_chrX_95754515_95755168
Length = 654
Score = 484 bits (250), Expect = e-141
Identities = 253/254 (99%)
Strand = Plus / Plus
Query: 1 tgaaaataatgtggctgaggaagaccaggagaaaaggacaacttccaattatacaaaacc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaaaataaagtggctgaggaagaccaggagaaaaggacaacttccaattatacaaaacc 260
Query: 61 tcacaaaggctatgccattttagggtagtggactgaggcatggagtaagctcccacgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacaaaggctatgccattttagggtagtggactgaggcatggagtaagctcccacgatc 320
Query: 121 tggacttatgtgatactctagtcttcaaactcttccatgccatgaaatagaattatttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggacttatgtgatactctagtcttcaaactcttccatgccatgaaatagaattatttga 380
Query: 181 acaatgttttgtaatgtggaaacaacatacctgtggcctcaactctcatctccaggaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaatgttttgtaatgtggaaacaacatacctgtggcctcaactctcatctccaggaagt 440
Query: 241 tttccttgagaact 254
||||||||||||||
Sbjct: 441 tttccttgagaact 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space: 158025
Effective search space used: 158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no427_i07.g1 MSMg01no427_i07.g1 CHROMAT_FILE:
MSMg01no427_i07.g1 PHD_FILE: MSMg01no427_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:25 2005
(494 letters)
>mm_chrX_95933524_95934418
Length = 895
Score = 926 bits (479), Expect = 0.0
Identities = 491/495 (99%), Gaps = 1/495 (0%)
Strand = Plus / Minus
Query: 1 tgaccattaatcatggactttcatgagcagagatgttaaacttaaccatgaacttttaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tgaccattaatcatggactttcatgagcagagatgttaaacttaaccatgaacttttaga 452
Query: 61 gtatactcaaaaggcagggaagag-aaaaaaattgtgacattttaataaacactaaagag 119
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 451 gtatactcaaaaggcagggaagagaaaaaaaattgtgacattttaataaacactaaagag 392
Query: 120 tttttccttatttcctatcttctgtaaagagaatatagtcacgactcgtcaagggaaatg 179
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 391 tttttccttatttcctatcttctgtaaagagaatatagtcaagactcgtcaagggaaatg 332
Query: 180 aacccctccaagatgcacagaaaatgggtggcagtttgggataggtcctatattctgact 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aacccctccaagatgcacagaaaatgggtggcagtttgggataggtcctatattctgact 272
Query: 240 cctaccttcttttttttggatcacatttaatgacccagaatttcataagtatattaagta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cctaccttcttttttttggatcacatttaatgacccagaatttcataagtatattaagta 212
Query: 300 tggaaggttcccgctgttgtgtgacactatttctggggagatataattaccccatatagg 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tggaaggttcctgctgttgtgtgacactatttctggggagatataattaccccatatagg 152
Query: 360 gaactgactagggaacaaagtacagatattgctaaaatccaatttggtgaaccaacgagt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gaactgactagggaacaaagtacagatattgctaaaatccaatttggtgaaccaacgagt 92
Query: 420 tttattgggttacttatagcgatctggttgaagggttacttacaggagcaggaattgctg 479
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 tttattgggttacttatagagatctggttgaagggttacttacaggagcaggaattgctg 32
Query: 480 aaaaaacaactgcat 494
|||||||||||||||
Sbjct: 31 aaaaaacaactgcat 17
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 895
Length adjustment: 10
Effective length of query: 484
Effective length of database: 885
Effective search space: 428340
Effective search space used: 428340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
