Query= MSMg01no433_l11.b1 MSMg01no433_l11.b1 CHROMAT_FILE:
MSMg01no433_l11.b1 PHD_FILE: MSMg01no433_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:53 2005
(425 letters)
>mm_chrX_157372308_157373132
Length = 825
Score = 630 bits (326), Expect = 0.0
Identities = 340/345 (98%), Gaps = 1/345 (0%)
Strand = Plus / Minus
Query: 1 attgaatataacagcatagaaattccaaaaacacaaatatacaatagggaataattacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 attgaatataacagcatagaaattccaaaaacacaaatatacaatagggaataattacaa 286
Query: 61 gtaaatcgttagttaagccattaattaaatagaaatgacatctctgaaagaccatattag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gtaaatcgttagttaagccattaattaaatagaaatgacatctctgaaagaccatattag 226
Query: 121 tatgtgtctcttctccatttcgctgctccctagaggtaattaatatcctgatttttgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tatgtgtctcttctccatttcgctgctccctagaggtaattaatatcctgatttttgtaa 166
Query: 181 caaacatataatcacatatatggctacatattatggtttgtggcttagtttttctgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 caaacatataatcacatatatggctacatattatggtttgtggcttagtttttctgtttt 106
Query: 241 atcat-gnattaaaagaaatgaggttgtttttattagttttctgttgtacagcaagttgc 299
| ||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 aacattgtaataaaagaaatgaggttgtttttattagttttctgttgtacagcaagttgc 46
Query: 300 cactattgttcctctaaaaatcgcccatatgctttagctcacagt 344
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 45 cactattgttcctctaaaaatcacccatatgctttagctcacagt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_l11.g1 MSMg01no433_l11.g1 CHROMAT_FILE:
MSMg01no433_l11.g1 PHD_FILE: MSMg01no433_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:53 2005
(450 letters)
>mm_chrX_157223771_157224620
Length = 850
Score = 833 bits (431), Expect = 0.0
Identities = 443/447 (99%)
Strand = Plus / Plus
Query: 1 acccaacatcctcttcatgggtcctccacatggaacatgtgcacatttgtgcacttatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acccaacatcctcttcatgggtcctccacatggaacatgtgcacatttgtgcacttatat 260
Query: 61 gcagcacacacacattataaacagcacagtagctgtttataatggaattgctgggcaaaa 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 gcagcacacacacattataaacagcatagtagctgtttataatggaattgctgggcaaaa 320
Query: 121 acttgataagataatgtctgtggggctgaccagggtctgccctttgaagcttgcaagtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttgataagataatgtctgtggggctgaccagggtctgccctttgaagcttgcaagtac 380
Query: 181 tgcttgggggtaaggtcttggccaccgagagggtgtacagctgtttatggtggaagctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcttgggggtaaggtcttggccaccgagagggtgtacagctgtttatggtggaagctct 440
Query: 241 ctctatgccacacttccttagaatccccagatggttttctgagggtgtccagagggctaa 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctaggccacacttccttagaatccccagatggttttctgagggtgtccagagggctaa 500
Query: 301 ctcatccttgttctcattcctcagtgaaaccatatcttcagtgagctcagacatctacaa 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcatccttggtctcattcctcagtgaaaccatatcttcagtgagctcagacatctacaa 560
Query: 361 gttccctcctgctttagctgtggctatcacctattcttctggtgctgtatagatcatcta 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtccctcctgctttagctgtggctatcacctattcttctggtgctgtatagatcatcta 620
Query: 421 atattctagtcctggcagatgctgcca 447
|||||||||||||||||||||||||||
Sbjct: 621 atattctagtcctggcagatgctgcca 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
