GCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGC
GGAATTCATTCTTTTCCNCACAGGTGAAAGGAGCAACCAACTACACAAAG
CTCTCCTTTGGCTTCCACATCCACACTATGCTCATCATATGTGCACACAT
CCTACACGCACACAATTTTTAAAAAATGAGCTACATTTGCAAGCCATACA
AAGAGAATTACAGACCCAAGGACTGTTATATAGGGAACACCAAGTACATG
AGCTGCTTCTCTTGTGACCCTGTAGACACTAGAGTGACTTCCACATAAGA
GCAATAACTAGAGAGAGCATGACCTGCTCACTTATAACTGCTGTGCACTG
CTTCCCTGTGTGACACCTTATAAGGCTCACATCTCAACTGAGAATTTTTC
CCTAAATATTGGAGTAGATTACAGAATTGGATTCTTACAGACAGTACCCA
GTTTTGCTTGGGCCTTTTGTAATGTGAGTCAGGCTTTGAAAGCTCTCCTC
AAGACCAAAATGTTCACAGAGGAATTCATAGGAAGCCATAACATAAAGTT
CAAGATTTGGCTTTAGTGAGTCAAATAGGCNAAATAATAACAGAAGACAG
GAAAACCAAGCCCACACAGAGCAGGATACTTGAAAACTTCAGTGTCTGTT
GAGATTTATTACCCAAAGATGAGCTTGTGGAAAAGGAAGCAATCTCTTCT
TGGAAAAAATTTCTAGACCTATTGTCAACGAACATAAATCACCAATA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTCCTAGTCACTCCCATTCTCGGG
GTGTAATAGTGGGGTGATGGGCAAGCAACGAATCGGGAGCTGTCACGCCA
TATCAGGTGCTGAAACGTCACGCTGCGGGTTATAAAAGCAGCGCCATTTT
CCTGGTTTGGGATCTTCCTGAGAAGCAAGCAATAAAGCTTTTGCCGCAGA
AGATTCTGGTTTGTTGCGTCTTTCTTGCCGGTCGAGCGGGACGCAATAAC
TTTGTTCATACATTGATGGACATGTGTATTGACTTATTTCATGGGTATAG
TGTATTTTACTGCAATAAATATGGGATAAGGATTTATTTTAAATATACTT
ATTTAATTTCAATTGGATATATGTATATATATATTATATATATAATATAT
ATAGTCAGCAATATTGCTTGCTCATTTGGTAATTCTAGTTTTAATTTTTC
TGAAGATGATTAAGCAAAGTATAAGTATGCATACTGACTGTCTTAGGGTT
TCTATTGCTGTGAAAAGATTTCATGGCTACAACTACTCTTATAAAGAAAA
ACATCGCATTGTGGCTGGATTACAGGTCTAGAAGGTTAATCCCCTATTCC
CATTGTCAGTTGAATGAAAATGGCCTCCTTAGGCTAAAAGAGATTGGTAC
CCTTATAAAATGTGGTCCTTGTTAGATTTATTACGGTCCTCGTGTAAAAC

Query= MSMg01no436_b17.b1 MSMg01no436_b17.b1 CHROMAT_FILE:
MSMg01no436_b17.b1 PHD_FILE: MSMg01no436_b17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:05 2005
         (581 letters)



>mm_chrX_155192403_155193383
          Length = 981

 Score = 1102 bits (570), Expect = 0.0
 Identities = 578/581 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtgaaaggagcaaccaactacacaaagctctcctttggcttccacatccacactatgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggtgaaaggagcaaccaactacacaaagctctcctttggcttccacatccacactatgct 260

                                                                       
Query: 61  catcatatgtgcacacatcctacacgcacacaatttttaaaaaatgagctacatttgcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcatatgtgcacacatcctacacgcacacaatttttaaaaaatgagctacatttgcaa 320

                                                                       
Query: 121 gccatacaaagagaattacagacccaaggactgttatatagggaacaccaagtacatgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccatacaaagagaattacagacccaaggactgttatatagggaacaccaagtacatgag 380

                                                                       
Query: 181 ctgcttctcttgtgaccctgtagacactagagtgacttccacataagagcaataactaga 240
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 ctgcttctcttgtgaccctgtagacactagagtgactttcacataagagcaataactaga 440

                                                                       
Query: 241 gagagcatgacctgctcacttataactgctgtgcactgcttccctgtgtgacaccttata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagagcatgacctgctcacttataactgctgtgcactgcttccctgtgtgacaccttata 500

                                                                       
Query: 301 aggctcacatctcaactgagaatttttccctaaatattggagtagattacagaattggat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggctcacatctcaactgagaatttttccctaaatattggagtagattacagaattggat 560

                                                                       
Query: 361 tcttacagacagtacccagttttgcttgggccttttgtaatgtgagtcaggctttgaaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttacagacagtacccagttttgcttgggccttttgtaatgtgagtcaggctttgaaag 620

                                                                       
Query: 421 ctctcctcaagaccaaaatgttcacagaggaattcataggaagccataacataaagttca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctctcctcaagaccaaaatgttcacagaggaattcataggaagccataacataaagttca 680

                                                                       
Query: 481 agatttggctttagtgagtcaaataggcnaaataataacagaagacaggaaaaccaagcc 540
           |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 681 agatttggctttagtgagtcaaataggcaaaataataacagaagaaaggaaaaccaagcc 740

                                                    
Query: 541 cacacagagcaggatacttgaaaacttcagtgtctgttgag 581
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cacacagagcaggatacttgaaaacttcagtgtctgttgag 781


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space:   554441
Effective search space used:   554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)