Query= MSMg01no437_e06.b1 MSMg01no437_e06.b1 CHROMAT_FILE:
MSMg01no437_e06.b1 PHD_FILE: MSMg01no437_e06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:35 2005
(340 letters)
>mm_chrX_7619993_7620732
Length = 740
Score = 561 bits (290), Expect = e-164
Identities = 302/306 (98%)
Strand = Plus / Minus
Query: 35 ccaccttcttgagttctttgtatatattggatatcagtcccctatctgatgctttgtttt 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccaccttcttgagttctttgtatatattggatatcagtcccctatctgatgctttgtttt 681
Query: 95 tcaagatgaggtttctctgtgtagccctggctgtcctagaactcactatgtagaccaggc 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcaagatgaggtttctctgtgtagccctggctgtcctagaactcactatgtagaccaggc 621
Query: 155 tggcgtcgaacttgcagagatctgcctgcctctgcatccaaagtattgggatcaaaggtg 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tggcgtcgaacttgcagagatctgcctgcctctgcatccaaagtattgggatcaaaggtg 561
Query: 215 tgtgctaccaccgctcagctaaaattagcaggtttttattttgtttctcatcaattatta 274
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 560 tgtgctaccaccgctcagctaaaattagcaggtctgaattttgtttctcatcaattatta 501
Query: 275 ctatttgatacctaataaagacaatctggttaaaagaaatattatattattatctaattt 334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctatttgatacctaaaaaagacaatctggttaaaagaaatattatattattatctaattt 441
Query: 335 ctttca 340
||||||
Sbjct: 440 ctttca 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_e06.g1 MSMg01no437_e06.g1 CHROMAT_FILE:
MSMg01no437_e06.g1 PHD_FILE: MSMg01no437_e06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:35 2005
(248 letters)
>mm_chrX_7448309_7448956
Length = 648
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1 caggccagcctggccttcttagtgagttcaagatcagtccaggcaatggccctctctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggccagcctggccttcttagtgagttcaagatcagtccaggcaatggccctctctcag 260
Query: 61 aaagcaactaatgttgtagtgtcttaaaacttgatgcgaacttgcatgagaatacagtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagcaactaatgttgtagtgtcttaaaacttgatgcgaacttgcatgagaatacagtgt 320
Query: 121 cctagcacccacacgatgccaatactgaccctttaattcctcacatagccatacccagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctagcacccacacgatgccaatactgaccctttaattcctcacatagccatacccagcc 380
Query: 181 tcatatacgcttgattcctgcctccactccatgtctgtacttctctgttcatctttttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatatacgcttgattcctgcctccactccatgtctgtacttctctgttcatctttttcc 440
Query: 241 tttgcctt 248
||||||||
Sbjct: 441 tttgcctt 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
