Query= MSMg01no437_o10.b1 MSMg01no437_o10.b1 CHROMAT_FILE:
MSMg01no437_o10.b1 PHD_FILE: MSMg01no437_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:27 2005
(274 letters)
>mm_chrX_17110935_17111606
Length = 672
Score = 497 bits (257), Expect = e-145
Identities = 267/271 (98%), Gaps = 2/271 (0%)
Strand = Plus / Plus
Query: 4 gaattctttgttttgctctgagccccatcttttaagagggttatttgattttctggagtc 63
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 204 gaattctttgtttagctctgagccccatcttttaagggggttatttgattttctggagtc 263
Query: 64 caccctcttgagttctttatatatattggatattagtcccctagtttcccttagaattta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caccctcttgagttctttatatatattggatattagtcccctagtttcccttagaattta 323
Query: 124 tctgttgagtcatgtaattatttgaagaaatcatataatgttgaaaatcttgtatttgaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctgttgagtcatgtaattatttgaagaaatcatataatgttgaaaatcttgtatttgaa 383
Query: 184 ggttgctgatttcatcctgtggtgtggtaacacatttaagaattaacataataaagtgtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggttgctgatttcatcctgtggtgtggtaacacatttaagaattaacataataaagtgtt 443
Query: 244 ggttttttttttaaaccacaacactggattg 274
|||||||||| |||||||||||||||||||
Sbjct: 444 ggtttttttt--aaaccacaacactggattg 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 672
Length adjustment: 9
Effective length of query: 265
Effective length of database: 663
Effective search space: 175695
Effective search space used: 175695
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no437_o10.g1 MSMg01no437_o10.g1 CHROMAT_FILE:
MSMg01no437_o10.g1 PHD_FILE: MSMg01no437_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:27 2005
(527 letters)
>mm_chrX_17271196_17272124
Length = 929
Score = 789 bits (408), Expect = 0.0
Identities = 412/414 (99%), Gaps = 2/414 (0%)
Strand = Plus / Minus
Query: 116 gccatctaatatgcatttatgagtggcaatagttgggcctacagcacttctgaaactgac 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 gccatctaatatgcatttatgagtggcaatagttgggcctacagcacttctgaaactgac 870
Query: 176 tggcccttcctcagtatctctgaatgcagggtgaaccttgtatgaagttccatggagaat 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 tggcccttcctcagtatctctgaatgcagggtgaaccttgtatgaagttccatggagaat 810
Query: 236 cccaccagcttctacaagtcacccacacctttgaagttgcagtgagagacagatgtgtgt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 cccaccagcttctacaagtcacccacacctttgaagttgcagtgagagacagatgtgtgt 750
Query: 296 ttcagtgtgctatccatgtgactactatgagtaattctgatgacagacaaatggcagctg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ttcagtgtgctatccatgtgactactatgagtaattctgatgacagacaaatggcagctg 690
Query: 356 cagttctttcatggtcttgttgacttcatatcatttttctttccacaataatttaaaggt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 cagttctttcatggtcttgttgacttcatatcatttttctttccacaataatttaaaggt 630
Query: 416 atacctgaggcccaacatcagaagcagaagcaagagatataacctacaaaaccagccagg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 atacctgaggcccaacatcagaagcagaagcaagagatataacctacaaaaccagccagg 570
Query: 476 agcatggctctgtgtaaagcactggaaaaac--atatgagggctctagatttca 527
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 569 agcatggctctgtgtaaagcactggaaaaacatatatgagggctctagatttca 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 929
Length adjustment: 10
Effective length of query: 517
Effective length of database: 919
Effective search space: 475123
Effective search space used: 475123
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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